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The map label for this gene is 89055524

Identifier: 89055524

GI number: 89055524

Start: 3055112

End: 3056443

Strand: Direct

Name: 89055524

Synonym: Jann_3033

Alternate gene names: NA

Gene position: 3055112-3056443 (Clockwise)

Preceding gene: 89055523

Following gene: 89055525

Centisome position: 70.75

GC content: 66.44

Gene sequence:

>1332_bases
GTGAAGACTGACAACCGCATCGCCTGGACCGAGGGCATGTTCCTGCGCGTCCAGCATTTCCAGCAGGCCGACCGATGGAC
GGAGCGTCTTGTGCGTGACCGCACGGGGGCGCTGACACCCTATCCCTGGGGCCTGACGCAGATCGCGCTGGACCGCTCGG
CCCTTGGCGTGGGGCGCGTTGCGCTGTCTTCCGTGGCGGGTATCCTGCCCGACGGCACGCCGTTTTCCGCCCCCGATCTG
GCCGATCTGCCCGCGCCGGTTGAGCTGGCCGAGGGGTCCGGTGCCACGACCGTCTACCTCGCCATGCAGATGCGCCGCAG
TGGCCAGCCCGAATACGGCCCCGCCGCCCGCCCCAATGCCCGCCACAAGCGCGAAGAATACGAGGCCGAGGATGCCAATT
CCGACACCTCCTTCACCGCTGCCATAGATGTCGGTCGCGCGGCGCTGTCCCTCAAAACCGATGCGGATGAGCGGGAAGGG
TTTGAATGCCTGCCCATCGCCCGCGTGGTGGAAACCCGTGCGGACCTGTCGGTCGTGCTGGACGAGGCGATGATCCCGCC
CCTGATGATCGTCGGAGCCAATCCGCGTCTCCATGGTTATCTGACTGAAATCGTTGGCCTTCTGCGCCACCGTGCCGCCG
CCATTGCCCGTCGCATGGGCGATCCGTCGATCCGGGGCGCGGCCGAAATCGGCGACTACATGATGCTTCAGGCGCTCAAC
CGCGCCACGCCTTTGATCGCCCATCTGGAAGGCCAGGCTGGCCAAATCCACCCCGAAGGTGCGTTTCGCCAATTGGTGGC
GCTGGCCGGTGAGTTGGCCACCTTCACCGCGTCTGACAACGTCGCGCCCGATATGCCCCAGTACCTTCACATGGACCCGG
AAGCGACCTTCGCCCCGGTGATGGATGAACTCCGCCGTTCGCTGTCTGCGGTGCTGGACCAATCCGCCACACCGATCCCG
CTGGAACTGCGCCGCCACGGCGTGCGTGTCGGTATGATCGCCGATGCGGGTCTCAAACACGACGCCTCCATGGTGCTGGC
CGCCCGTGCCGATCTGCCCGCCGAACAGCTGCGTCGTGCCCTGCCGAACCAGATCAAGATCGGGCCGGTGGAACGCATCG
CCGAACTGGTCAACGTCGCCCTTCCGGGCATCCCCGTGCGGCCCCTGCCGGTGGCCCCGCGCCAGCTGCCCTACCGCGCC
GGGTCCGTCTATTTTGAACTGGACACATCCGATGATCTCTGGCGGACCACGTCCGACGGAGGGGCCATCGCCATCCATCT
GGCCACCGATATTCCCGGCCTTGATCTTGAGCTGTGGGGGATCCGGGGATGA

Upstream 100 bases:

>100_bases
CCCCCCTGTCCGAGGCCGCGCTGCTGTCCGCAATCGCGGCGCGCTACGGAAAGACCAGCACAGAAGCCATTGATGACACT
GATGAATCGGGGGGAACCGG

Downstream 100 bases:

>100_bases
GCCGACCGGACCACGATGACGCAGAGGACGCCCCGCGCATCATCATGCCGACACCCGGTGGCAAACGCCCGGAGGTGGAG
CCTGAAGCAGCCCCCGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKTDNRIAWTEGMFLRVQHFQQADRWTERLVRDRTGALTPYPWGLTQIALDRSALGVGRVALSSVAGILPDGTPFSAPDL
ADLPAPVELAEGSGATTVYLAMQMRRSGQPEYGPAARPNARHKREEYEAEDANSDTSFTAAIDVGRAALSLKTDADEREG
FECLPIARVVETRADLSVVLDEAMIPPLMIVGANPRLHGYLTEIVGLLRHRAAAIARRMGDPSIRGAAEIGDYMMLQALN
RATPLIAHLEGQAGQIHPEGAFRQLVALAGELATFTASDNVAPDMPQYLHMDPEATFAPVMDELRRSLSAVLDQSATPIP
LELRRHGVRVGMIADAGLKHDASMVLAARADLPAEQLRRALPNQIKIGPVERIAELVNVALPGIPVRPLPVAPRQLPYRA
GSVYFELDTSDDLWRTTSDGGAIAIHLATDIPGLDLELWGIRG

Sequences:

>Translated_443_residues
MKTDNRIAWTEGMFLRVQHFQQADRWTERLVRDRTGALTPYPWGLTQIALDRSALGVGRVALSSVAGILPDGTPFSAPDL
ADLPAPVELAEGSGATTVYLAMQMRRSGQPEYGPAARPNARHKREEYEAEDANSDTSFTAAIDVGRAALSLKTDADEREG
FECLPIARVVETRADLSVVLDEAMIPPLMIVGANPRLHGYLTEIVGLLRHRAAAIARRMGDPSIRGAAEIGDYMMLQALN
RATPLIAHLEGQAGQIHPEGAFRQLVALAGELATFTASDNVAPDMPQYLHMDPEATFAPVMDELRRSLSAVLDQSATPIP
LELRRHGVRVGMIADAGLKHDASMVLAARADLPAEQLRRALPNQIKIGPVERIAELVNVALPGIPVRPLPVAPRQLPYRA
GSVYFELDTSDDLWRTTSDGGAIAIHLATDIPGLDLELWGIRG
>Mature_443_residues
MKTDNRIAWTEGMFLRVQHFQQADRWTERLVRDRTGALTPYPWGLTQIALDRSALGVGRVALSSVAGILPDGTPFSAPDL
ADLPAPVELAEGSGATTVYLAMQMRRSGQPEYGPAARPNARHKREEYEAEDANSDTSFTAAIDVGRAALSLKTDADEREG
FECLPIARVVETRADLSVVLDEAMIPPLMIVGANPRLHGYLTEIVGLLRHRAAAIARRMGDPSIRGAAEIGDYMMLQALN
RATPLIAHLEGQAGQIHPEGAFRQLVALAGELATFTASDNVAPDMPQYLHMDPEATFAPVMDELRRSLSAVLDQSATPIP
LELRRHGVRVGMIADAGLKHDASMVLAARADLPAEQLRRALPNQIKIGPVERIAELVNVALPGIPVRPLPVAPRQLPYRA
GSVYFELDTSDDLWRTTSDGGAIAIHLATDIPGLDLELWGIRG

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48028; Mature: 48028

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDNRIAWTEGMFLRVQHFQQADRWTERLVRDRTGALTPYPWGLTQIALDRSALGVGRV
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
ALSSVAGILPDGTPFSAPDLADLPAPVELAEGSGATTVYLAMQMRRSGQPEYGPAARPNA
HHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCC
RHKREEYEAEDANSDTSFTAAIDVGRAALSLKTDADEREGFECLPIARVVETRADLSVVL
HHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCHHCCCEEEHHHHHHHHHHHHHHHH
DEAMIPPLMIVGANPRLHGYLTEIVGLLRHRAAAIARRMGDPSIRGAAEIGDYMMLQALN
HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RATPLIAHLEGQAGQIHPEGAFRQLVALAGELATFTASDNVAPDMPQYLHMDPEATFAPV
HCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHEECCCCCHHHHH
MDELRRSLSAVLDQSATPIPLELRRHGVRVGMIADAGLKHDASMVLAARADLPAEQLRRA
HHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHH
LPNQIKIGPVERIAELVNVALPGIPVRPLPVAPRQLPYRAGSVYFELDTSDDLWRTTSDG
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCC
GAIAIHLATDIPGLDLELWGIRG
CEEEEEEECCCCCCCEEEEECCC
>Mature Secondary Structure
MKTDNRIAWTEGMFLRVQHFQQADRWTERLVRDRTGALTPYPWGLTQIALDRSALGVGRV
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
ALSSVAGILPDGTPFSAPDLADLPAPVELAEGSGATTVYLAMQMRRSGQPEYGPAARPNA
HHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCC
RHKREEYEAEDANSDTSFTAAIDVGRAALSLKTDADEREGFECLPIARVVETRADLSVVL
HHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCHHCCCEEEHHHHHHHHHHHHHHHH
DEAMIPPLMIVGANPRLHGYLTEIVGLLRHRAAAIARRMGDPSIRGAAEIGDYMMLQALN
HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RATPLIAHLEGQAGQIHPEGAFRQLVALAGELATFTASDNVAPDMPQYLHMDPEATFAPV
HCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHEECCCCCHHHHH
MDELRRSLSAVLDQSATPIPLELRRHGVRVGMIADAGLKHDASMVLAARADLPAEQLRRA
HHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHH
LPNQIKIGPVERIAELVNVALPGIPVRPLPVAPRQLPYRAGSVYFELDTSDDLWRTTSDG
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCC
GAIAIHLATDIPGLDLELWGIRG
CEEEEEEECCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA