| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055515
Identifier: 89055515
GI number: 89055515
Start: 3045161
End: 3046240
Strand: Direct
Name: 89055515
Synonym: Jann_3024
Alternate gene names: NA
Gene position: 3045161-3046240 (Clockwise)
Preceding gene: 89055501
Following gene: 89055516
Centisome position: 70.52
GC content: 60.09
Gene sequence:
>1080_bases ATGAGTTCTAGTGATAATTGGCGAGAAAGAATTTCCGTGCCGGATGCGTCTCATACTGCGAATAACGACGGAAGTGTCGG CGAAAATCCGCGCGAAACGGATCGGGCAATTGCGGAATACCGCCGACTGCGCGACGCCCGCTCGGCCGCCCGCGCCGAGG AGCGGAAACAGGAAACGGCGGAGGCCCGTGATCGGGCCCTGAAGGTCGCCCCGGATTGGACCATTGTGCGCGATCTGGCC CGGTTCCTGCTTGACGAAGTCGGGCGCGATATCGAGGTCGCTGTTTGGTTGATCGAAGCCGAGACGCGGCTGGACGGCTT CGACGGGCTGGCCCGCGCGGCAGAGCAATTGGCCGACATGATTAACGCCCATGGCATGGCGCTTCACCCGCAACCCGAAG ACGCTTTAGATCGGCCGTTTGACATGATTGCCGGTCTCAATGGGATCGGTCGAGAGGGCACTTTGATCCAACCGCTTCGG CTTGTACCACTGGTGGCCGAGGGCGATTATGGTCAACAGGGGTTGTGGAATGTCACCGACGGCGGCGGCGCAGCGAGCGT TGCAGCAGCCTTGGCCACCAGTGGTACAGAGCAGATTTCCCACCACTTAAACGGTGTGGACCGCGCGCGCCGCGCAGTCG CCCGTTGCGATACCGCCCTGACCGCGCTTCTGGGGCCGGACGCACCGCCGTTCAACAAAATTGACGAAAGCCTGGAAGAC GCAGCCGCCGCGATCCGCAACCTTGCGGGCCATCTTTTGACGTCGGAACCCGACGAGAATACCGCCGATGCGACAGGTCT CGGCGAGGATCCGCCCACCACCTCTGCCACGACGCAAGTAATGGGTAAAATTTCATCGCGGGACGAGGCCTTCGCACAAA TGTTACGCATTGCTGCTTATTTCCGCAAAACCGAACCCCATTCTCCAATCGCCGATACGCTTGAAACATTGGTTCGGCGT GGACGTATGGATTTTGTGACTTTGCTGACGGAATTGATACCGGACGATCACGCCCGCCAGGCGGTAATGACCACCGCAGG AATAGGTTCAAAACCTCCCACCTCCGAGACAGAGGGCTGA
Upstream 100 bases:
>100_bases GCGCGACGTTCAACCATTCTATTCGGTCGGCAACGGCGATCGCTTGAGCTATGGTGACAAAGAGAATCAATGAAATCGCA TGACTAACTAACTGTATTTC
Downstream 100 bases:
>100_bases CGCAAGCATAATTAGATCTAAATAAGTAGAAACACGATTTTCTTAAGGCCATTACGGAGAATTACCCGGCGAATCAACGC GGAATTGGCCCTGAAAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: ImpA-Like
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSSSDNWRERISVPDASHTANNDGSVGENPRETDRAIAEYRRLRDARSAARAEERKQETAEARDRALKVAPDWTIVRDLA RFLLDEVGRDIEVAVWLIEAETRLDGFDGLARAAEQLADMINAHGMALHPQPEDALDRPFDMIAGLNGIGREGTLIQPLR LVPLVAEGDYGQQGLWNVTDGGGAASVAAALATSGTEQISHHLNGVDRARRAVARCDTALTALLGPDAPPFNKIDESLED AAAAIRNLAGHLLTSEPDENTADATGLGEDPPTTSATTQVMGKISSRDEAFAQMLRIAAYFRKTEPHSPIADTLETLVRR GRMDFVTLLTELIPDDHARQAVMTTAGIGSKPPTSETEG
Sequences:
>Translated_359_residues MSSSDNWRERISVPDASHTANNDGSVGENPRETDRAIAEYRRLRDARSAARAEERKQETAEARDRALKVAPDWTIVRDLA RFLLDEVGRDIEVAVWLIEAETRLDGFDGLARAAEQLADMINAHGMALHPQPEDALDRPFDMIAGLNGIGREGTLIQPLR LVPLVAEGDYGQQGLWNVTDGGGAASVAAALATSGTEQISHHLNGVDRARRAVARCDTALTALLGPDAPPFNKIDESLED AAAAIRNLAGHLLTSEPDENTADATGLGEDPPTTSATTQVMGKISSRDEAFAQMLRIAAYFRKTEPHSPIADTLETLVRR GRMDFVTLLTELIPDDHARQAVMTTAGIGSKPPTSETEG >Mature_358_residues SSSDNWRERISVPDASHTANNDGSVGENPRETDRAIAEYRRLRDARSAARAEERKQETAEARDRALKVAPDWTIVRDLAR FLLDEVGRDIEVAVWLIEAETRLDGFDGLARAAEQLADMINAHGMALHPQPEDALDRPFDMIAGLNGIGREGTLIQPLRL VPLVAEGDYGQQGLWNVTDGGGAASVAAALATSGTEQISHHLNGVDRARRAVARCDTALTALLGPDAPPFNKIDESLEDA AAAIRNLAGHLLTSEPDENTADATGLGEDPPTTSATTQVMGKISSRDEAFAQMLRIAAYFRKTEPHSPIADTLETLVRRG RMDFVTLLTELIPDDHARQAVMTTAGIGSKPPTSETEG
Specific function: Unknown
COG id: COG3515
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38741; Mature: 38610
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSDNWRERISVPDASHTANNDGSVGENPRETDRAIAEYRRLRDARSAARAEERKQETA CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARDRALKVAPDWTIVRDLARFLLDEVGRDIEVAVWLIEAETRLDGFDGLARAAEQLADM HHHHHEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHH INAHGMALHPQPEDALDRPFDMIAGLNGIGREGTLIQPLRLVPLVAEGDYGQQGLWNVTD HHHCCCEECCCCCHHHHCCHHHHHCCCCCCCCCCEECCHHHEEEEECCCCCCCCCCCCCC GGGAASVAAALATSGTEQISHHLNGVDRARRAVARCDTALTALLGPDAPPFNKIDESLED CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AAAAIRNLAGHLLTSEPDENTADATGLGEDPPTTSATTQVMGKISSRDEAFAQMLRIAAY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH FRKTEPHSPIADTLETLVRRGRMDFVTLLTELIPDDHARQAVMTTAGIGSKPPTSETEG HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SSSDNWRERISVPDASHTANNDGSVGENPRETDRAIAEYRRLRDARSAARAEERKQETA CCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARDRALKVAPDWTIVRDLARFLLDEVGRDIEVAVWLIEAETRLDGFDGLARAAEQLADM HHHHHEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHH INAHGMALHPQPEDALDRPFDMIAGLNGIGREGTLIQPLRLVPLVAEGDYGQQGLWNVTD HHHCCCEECCCCCHHHHCCHHHHHCCCCCCCCCCEECCHHHEEEEECCCCCCCCCCCCCC GGGAASVAAALATSGTEQISHHLNGVDRARRAVARCDTALTALLGPDAPPFNKIDESLED CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AAAAIRNLAGHLLTSEPDENTADATGLGEDPPTTSATTQVMGKISSRDEAFAQMLRIAAY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH FRKTEPHSPIADTLETLVRRGRMDFVTLLTELIPDDHARQAVMTTAGIGSKPPTSETEG HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA