| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055463
Identifier: 89055463
GI number: 89055463
Start: 2990447
End: 2991169
Strand: Direct
Name: 89055463
Synonym: Jann_2972
Alternate gene names: NA
Gene position: 2990447-2991169 (Clockwise)
Preceding gene: 89055462
Following gene: 89055464
Centisome position: 69.26
GC content: 63.49
Gene sequence:
>723_bases ATGAAACGGGCGGTGCTCTGTCTGATTGTCGCGCTATGCGTGCCGGTCGCGGCAATCGCGCAATCGGGGTTCACCTTCGG CGCAAGCCCTGGCCTGCGCGACACGCCCCGCGCGCTTGAGCTGTTTGACGACATCCAGGGCTACGCCGATCTTGCGCCGG AGCGTCACGGGACGGTCGACCAACCCCTTCAAACCGAGCTTGGCACACACCTGCTGCTTCGCGCGTTCCGCAATGTCTGC CTTGGCATCGAGCAGGGACGCGCGCTCGCCGATGTGATGCCGGGCGACTTTGCGCCCTACGTGACCTTGCCCTACTCCTT CGGTGACATCGAAGAGCCTGATTACGGCCCCGGACGCCGCGTGCTGTCGTCTACCGGGTCTATCGACACCGACGAAGACG AAGGGCGCCCGTTCATCTGGCTCGCCCCTGACCCTGCGGGTCTGTCCTGCCGGATCGAATGGCATATAGACGGGAACCTG CCAGAGGCACGTCAGCATGCGATCGCAAGCTATCTGGACAATTGGGTTCCGTGGCAATTCGCGCTGGTCCACGGCTCTCG CCCAGTCCTTGGCACTGCGCCGATGCCATCGCACGTCTCGGAATGGGACAGGCCTTGCGGCGACCGGTGGTGCCCGCTGG TGATCCTCTACAGTTTCGTCGGCGGTCAGATCAGTGTCGAGACCGTGCTCAACATCACCGACATTGAAGGGGACCTCCCA TGA
Upstream 100 bases:
>100_bases TCCTGTCGTTCCTGTTTGAAAACTGGGGCAGCGTAATCAACGAAGAGAAGTTCATTGCCCGCATCCGTCTGTTCAATTCA GAGCTGGAGGAGCGGAAGCG
Downstream 100 bases:
>100_bases CCAACACACTCTATTGCTTCGGTGAAAGCGGGAACGCCTACAAAGCCGCCCTTGCGCTGGAGTTGGCTGGCATTCCCTGG ACGCCCCGTCATGTGGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKRAVLCLIVALCVPVAAIAQSGFTFGASPGLRDTPRALELFDDIQGYADLAPERHGTVDQPLQTELGTHLLLRAFRNVC LGIEQGRALADVMPGDFAPYVTLPYSFGDIEEPDYGPGRRVLSSTGSIDTDEDEGRPFIWLAPDPAGLSCRIEWHIDGNL PEARQHAIASYLDNWVPWQFALVHGSRPVLGTAPMPSHVSEWDRPCGDRWCPLVILYSFVGGQISVETVLNITDIEGDLP
Sequences:
>Translated_240_residues MKRAVLCLIVALCVPVAAIAQSGFTFGASPGLRDTPRALELFDDIQGYADLAPERHGTVDQPLQTELGTHLLLRAFRNVC LGIEQGRALADVMPGDFAPYVTLPYSFGDIEEPDYGPGRRVLSSTGSIDTDEDEGRPFIWLAPDPAGLSCRIEWHIDGNL PEARQHAIASYLDNWVPWQFALVHGSRPVLGTAPMPSHVSEWDRPCGDRWCPLVILYSFVGGQISVETVLNITDIEGDLP >Mature_240_residues MKRAVLCLIVALCVPVAAIAQSGFTFGASPGLRDTPRALELFDDIQGYADLAPERHGTVDQPLQTELGTHLLLRAFRNVC LGIEQGRALADVMPGDFAPYVTLPYSFGDIEEPDYGPGRRVLSSTGSIDTDEDEGRPFIWLAPDPAGLSCRIEWHIDGNL PEARQHAIASYLDNWVPWQFALVHGSRPVLGTAPMPSHVSEWDRPCGDRWCPLVILYSFVGGQISVETVLNITDIEGDLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26264; Mature: 26264
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAVLCLIVALCVPVAAIAQSGFTFGASPGLRDTPRALELFDDIQGYADLAPERHGTVD CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC QPLQTELGTHLLLRAFRNVCLGIEQGRALADVMPGDFAPYVTLPYSFGDIEEPDYGPGRR CCHHHHHHHHHHHHHHHHHHHCHHCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHH VLSSTGSIDTDEDEGRPFIWLAPDPAGLSCRIEWHIDGNLPEARQHAIASYLDNWVPWQF HHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE ALVHGSRPVLGTAPMPSHVSEWDRPCGDRWCPLVILYSFVGGQISVETVLNITDIEGDLP EEEECCCCCEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEEEEECCCCCCC >Mature Secondary Structure MKRAVLCLIVALCVPVAAIAQSGFTFGASPGLRDTPRALELFDDIQGYADLAPERHGTVD CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC QPLQTELGTHLLLRAFRNVCLGIEQGRALADVMPGDFAPYVTLPYSFGDIEEPDYGPGRR CCHHHHHHHHHHHHHHHHHHHCHHCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHH VLSSTGSIDTDEDEGRPFIWLAPDPAGLSCRIEWHIDGNLPEARQHAIASYLDNWVPWQF HHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE ALVHGSRPVLGTAPMPSHVSEWDRPCGDRWCPLVILYSFVGGQISVETVLNITDIEGDLP EEEECCCCCEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA