| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is zntR [C]
Identifier: 89055460
GI number: 89055460
Start: 2987844
End: 2988236
Strand: Direct
Name: zntR [C]
Synonym: Jann_2969
Alternate gene names: 89055460
Gene position: 2987844-2988236 (Clockwise)
Preceding gene: 89055459
Following gene: 89055461
Centisome position: 69.2
GC content: 61.83
Gene sequence:
>393_bases ATGACCGCTGAAACCATGACCATCCGCGAGATGTGTGACGCCTACGACGTCACGCCGCGGACCTTGCGCTTCTACGAATC CAAAGAGCTGCTCTACCCCATCCGTGAGGGTCAGCGCCGCCTCTTCACCCGCCGCGACCGCGCGCGCCTGAAGCTGATCC TGCGTGGCAAGCGCTTCGGCTTCTCGCTGGAAGAAATCCGCCAACTGCTGGACCTCTATTACGTCGGCGACAGCCAGGAA ACGCAGTTGGTCAGCACGCTGTCCATTGCCCGCGAACGCCTGAGCGACATGGAACGACAACGCGCGGAGCTTGACGAAGC CATCGACGAGCTGCGCAGCCAGATGAGCCTAGTGGCCGACATGCTGAAAAACCCAAACAGCAGCGCCGCCTGA
Upstream 100 bases:
>100_bases ACGTCTGAATTACGTAAACGTCATCTTTGCTTGTACGGTGGCTCAACGACTCGCACATGGGCCTTAATGTTGTATGTTTG ATCATAGTGAGACCCAAACC
Downstream 100 bases:
>100_bases ACCCAAACGACCCGCCGGGAGAGACCCAATGCCGAGCTATACCGCCCCCACGAAAGACATGCAGTTCATCCTGCACGATG TGCTGAACATCTCTGCCCAG
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; MerR-Family Transcriptional Regulator; Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; Transcriptional Regulator Merr Family; Regulatory Protein; MerR Family Regulatory Family; Transcription Regulator Protein; Mercuric Resistance Operon Regulatory Protein
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTAETMTIREMCDAYDVTPRTLRFYESKELLYPIREGQRRLFTRRDRARLKLILRGKRFGFSLEEIRQLLDLYYVGDSQE TQLVSTLSIARERLSDMERQRAELDEAIDELRSQMSLVADMLKNPNSSAA
Sequences:
>Translated_130_residues MTAETMTIREMCDAYDVTPRTLRFYESKELLYPIREGQRRLFTRRDRARLKLILRGKRFGFSLEEIRQLLDLYYVGDSQE TQLVSTLSIARERLSDMERQRAELDEAIDELRSQMSLVADMLKNPNSSAA >Mature_129_residues TAETMTIREMCDAYDVTPRTLRFYESKELLYPIREGQRRLFTRRDRARLKLILRGKRFGFSLEEIRQLLDLYYVGDSQET QLVSTLSIARERLSDMERQRAELDEAIDELRSQMSLVADMLKNPNSSAA
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789687, Length=99, Percent_Identity=38.3838383838384, Blast_Score=61, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15300; Mature: 15169
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAETMTIREMCDAYDVTPRTLRFYESKELLYPIREGQRRLFTRRDRARLKLILRGKRFG CCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FSLEEIRQLLDLYYVGDSQETQLVSTLSIARERLSDMERQRAELDEAIDELRSQMSLVAD CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLKNPNSSAA HHCCCCCCCC >Mature Secondary Structure TAETMTIREMCDAYDVTPRTLRFYESKELLYPIREGQRRLFTRRDRARLKLILRGKRFG CCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FSLEEIRQLLDLYYVGDSQETQLVSTLSIARERLSDMERQRAELDEAIDELRSQMSLVAD CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLKNPNSSAA HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA