| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055443
Identifier: 89055443
GI number: 89055443
Start: 2974092
End: 2975048
Strand: Direct
Name: 89055443
Synonym: Jann_2952
Alternate gene names: NA
Gene position: 2974092-2975048 (Clockwise)
Preceding gene: 89055436
Following gene: 89055444
Centisome position: 68.88
GC content: 63.43
Gene sequence:
>957_bases ATGGCAAAGCTGACCCGTCAGGACATATACGACACCGCGAAAGAGCTGTCGAACTGGGGCCGTTGGGGCGAGGATGACCA GATCGGCACGCTGAACAATGTCTCGCCCGAGGATATCGTCGCGGCGGCGGGGCTGGTGCGAAAGGGCAAGACCTTCGCGC TGGGGCTGGACCTGAAGGAGAAGATCCAGTCGGGCCTGTTCGGCGGGCGGTGGAACATGATCCACCAGATGCTGGCCACC GGCACCGACGCGGTAACCGGCGAGCAGGACGGCGATGGCAAGGCCTACTTGCGCTACGCCGATGATGCGATCAACCTGCC GTGTCAGGGCAGCACGCAATGGGACGCGCTGTGTCACATCTTCCTCGATGATCAGATGTATAACGGATACCCGGCGACGG ACGTGACCGTGAACGGCGCGAAACGACTGGGGATCGAGCATGTGCGCGACAAGATGGTCGGGCGCGGGGTGCTGCTGGAT ATTGCGCGGTGGAAGGGCGTGGACAGTCTGGACGATGGATATGGCATCACCAACGCCGATCTGGATGGCTGCGCCGAGGC GCAGGGGGTTGAGATCCGCAAAGGCGATTTCGTGATCGTGCGCACCGGGCATCAGGAGCGGTGCCTGAGCGCAGGGGATT GGGCCGGCTACGCAGGCGGTGACGCGCCGGGCCTGTCGTTCGAGACGGCCCGCTGGATCAAGGGCCACGACATCGCCGCG ATCTGTGCCGACACCTGGGGCTGCGAGGTGCGCCCGAATGAGACGGATGAGGCCAACCAGCCGTGGCATTGGGTCGTCAT TCCAGCCATCGGCATCTCCATGGGCGAGATCTTTTACCTCAAGGAATTGGGAGAGGATTGCGCGCAGGACGGCGTCTACG AATTCCTTTTCACCGCGCCGCCGCTACACATTCCGGGGGCAGCGGGCTCTCCGATCAACCCGCAAGCGATCAAGTGA
Upstream 100 bases:
>100_bases GTGTTCAGCAAAGGCTAGCATCTATTTATCGGTCGATCATTAGTCTTTTTCGGAACAGGTTCCGGAAGGCATCAAGACCG TTATGTTTGGGAGGAAAATC
Downstream 100 bases:
>100_bases GGGCGGGCAAGTGATCCTCTGGGGACGGCCCTCTTCGGTCAATGTTCAGAAGGTGATGTGGGCGCTGGCTGAGCGTCGCA CGGCCTATGAGCACCGCATC
Product: putative cyclase
Products: NA
Alternate protein names: Cyclase Family Protein; Polyketide Cyclase; Metal-Dependent Hydrolase; Yclase SCIF3.09c; Exported Cyclase; Cyclase Family; Conserved Protein; Metal-Dependent Cyclase Family Protein
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MAKLTRQDIYDTAKELSNWGRWGEDDQIGTLNNVSPEDIVAAAGLVRKGKTFALGLDLKEKIQSGLFGGRWNMIHQMLAT GTDAVTGEQDGDGKAYLRYADDAINLPCQGSTQWDALCHIFLDDQMYNGYPATDVTVNGAKRLGIEHVRDKMVGRGVLLD IARWKGVDSLDDGYGITNADLDGCAEAQGVEIRKGDFVIVRTGHQERCLSAGDWAGYAGGDAPGLSFETARWIKGHDIAA ICADTWGCEVRPNETDEANQPWHWVVIPAIGISMGEIFYLKELGEDCAQDGVYEFLFTAPPLHIPGAAGSPINPQAIK
Sequences:
>Translated_318_residues MAKLTRQDIYDTAKELSNWGRWGEDDQIGTLNNVSPEDIVAAAGLVRKGKTFALGLDLKEKIQSGLFGGRWNMIHQMLAT GTDAVTGEQDGDGKAYLRYADDAINLPCQGSTQWDALCHIFLDDQMYNGYPATDVTVNGAKRLGIEHVRDKMVGRGVLLD IARWKGVDSLDDGYGITNADLDGCAEAQGVEIRKGDFVIVRTGHQERCLSAGDWAGYAGGDAPGLSFETARWIKGHDIAA ICADTWGCEVRPNETDEANQPWHWVVIPAIGISMGEIFYLKELGEDCAQDGVYEFLFTAPPLHIPGAAGSPINPQAIK >Mature_317_residues AKLTRQDIYDTAKELSNWGRWGEDDQIGTLNNVSPEDIVAAAGLVRKGKTFALGLDLKEKIQSGLFGGRWNMIHQMLATG TDAVTGEQDGDGKAYLRYADDAINLPCQGSTQWDALCHIFLDDQMYNGYPATDVTVNGAKRLGIEHVRDKMVGRGVLLDI ARWKGVDSLDDGYGITNADLDGCAEAQGVEIRKGDFVIVRTGHQERCLSAGDWAGYAGGDAPGLSFETARWIKGHDIAAI CADTWGCEVRPNETDEANQPWHWVVIPAIGISMGEIFYLKELGEDCAQDGVYEFLFTAPPLHIPGAAGSPINPQAIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34573; Mature: 34442
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLTRQDIYDTAKELSNWGRWGEDDQIGTLNNVSPEDIVAAAGLVRKGKTFALGLDLKE CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHH KIQSGLFGGRWNMIHQMLATGTDAVTGEQDGDGKAYLRYADDAINLPCQGSTQWDALCHI HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHEEEE FLDDQMYNGYPATDVTVNGAKRLGIEHVRDKMVGRGVLLDIARWKGVDSLDDGYGITNAD EECCCCCCCCCCCCEEECCHHHHCHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCC LDGCAEAQGVEIRKGDFVIVRTGHQERCLSAGDWAGYAGGDAPGLSFETARWIKGHDIAA CCCCCCCCCCEEECCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEE ICADTWGCEVRPNETDEANQPWHWVVIPAIGISMGEIFYLKELGEDCAQDGVYEFLFTAP EEECCCCCEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEHHHCCC PLHIPGAAGSPINPQAIK CCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKLTRQDIYDTAKELSNWGRWGEDDQIGTLNNVSPEDIVAAAGLVRKGKTFALGLDLKE CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHH KIQSGLFGGRWNMIHQMLATGTDAVTGEQDGDGKAYLRYADDAINLPCQGSTQWDALCHI HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHEEEE FLDDQMYNGYPATDVTVNGAKRLGIEHVRDKMVGRGVLLDIARWKGVDSLDDGYGITNAD EECCCCCCCCCCCCEEECCHHHHCHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCC LDGCAEAQGVEIRKGDFVIVRTGHQERCLSAGDWAGYAGGDAPGLSFETARWIKGHDIAA CCCCCCCCCCEEECCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEE ICADTWGCEVRPNETDEANQPWHWVVIPAIGISMGEIFYLKELGEDCAQDGVYEFLFTAP EEECCCCCEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEHHHCCC PLHIPGAAGSPINPQAIK CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA