| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055334
Identifier: 89055334
GI number: 89055334
Start: 2860104
End: 2860409
Strand: Reverse
Name: 89055334
Synonym: Jann_2843
Alternate gene names: NA
Gene position: 2860409-2860104 (Counterclockwise)
Preceding gene: 89055341
Following gene: 89055333
Centisome position: 66.24
GC content: 57.52
Gene sequence:
>306_bases ATGATGACCATCACCTACAAATTACCGGGACATCTCGACAGCGCTGTCGCCGCGCCATTGGCCTCTGAGCTTACGGATCG CTGCGGCCAGCCCATTTGCATTGATGCCGGTGAGGTTACCTTCGTTGGAACGCTGCCACTTCAGATCCTCGTCGCAGCCC GAAAACAATGGGCCGAAGATGAGCAGAGCTTTCAGATTGCACCGCTTAGTCAGGCCTTCGTGGCATCAGTAGAAGGGCTT GGCGTGTCCCTGCAGGATATCAATGCAACCGATACAGGCCTTGCAGCCGGGGAGGGCCGCGCATGA
Upstream 100 bases:
>100_bases AGGCGTCGCGATGCCAATGCCCATGCGTCGGGCAATGGTTGCGACACCCTGACCTGGACAATGCGGCATCGCCGGACGCG GTATGCGGATGAGGAGTGAG
Downstream 100 bases:
>100_bases GCCTCTCGGTCCTGGCCATTGACGATTCCCGAACCATGCGGAACCTGCTGAGCGCAGCCTTGGGCCGCGTCGGCTACGAC ATCGACCTTGCCGAAGACGG
Product: CheX protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MMTITYKLPGHLDSAVAAPLASELTDRCGQPICIDAGEVTFVGTLPLQILVAARKQWAEDEQSFQIAPLSQAFVASVEGL GVSLQDINATDTGLAAGEGRA
Sequences:
>Translated_101_residues MMTITYKLPGHLDSAVAAPLASELTDRCGQPICIDAGEVTFVGTLPLQILVAARKQWAEDEQSFQIAPLSQAFVASVEGL GVSLQDINATDTGLAAGEGRA >Mature_101_residues MMTITYKLPGHLDSAVAAPLASELTDRCGQPICIDAGEVTFVGTLPLQILVAARKQWAEDEQSFQIAPLSQAFVASVEGL GVSLQDINATDTGLAAGEGRA
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10529; Mature: 10529
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTITYKLPGHLDSAVAAPLASELTDRCGQPICIDAGEVTFVGTLPLQILVAARKQWAED CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEECHHHHHHHHHHHHCCCC EQSFQIAPLSQAFVASVEGLGVSLQDINATDTGLAAGEGRA CCCEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MMTITYKLPGHLDSAVAAPLASELTDRCGQPICIDAGEVTFVGTLPLQILVAARKQWAED CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEECHHHHHHHHHHHHCCCC EQSFQIAPLSQAFVASVEGLGVSLQDINATDTGLAAGEGRA CCCEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA