The gene/protein map for NC_008380 is currently unavailable.
Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055334

Identifier: 89055334

GI number: 89055334

Start: 2860104

End: 2860409

Strand: Reverse

Name: 89055334

Synonym: Jann_2843

Alternate gene names: NA

Gene position: 2860409-2860104 (Counterclockwise)

Preceding gene: 89055341

Following gene: 89055333

Centisome position: 66.24

GC content: 57.52

Gene sequence:

>306_bases
ATGATGACCATCACCTACAAATTACCGGGACATCTCGACAGCGCTGTCGCCGCGCCATTGGCCTCTGAGCTTACGGATCG
CTGCGGCCAGCCCATTTGCATTGATGCCGGTGAGGTTACCTTCGTTGGAACGCTGCCACTTCAGATCCTCGTCGCAGCCC
GAAAACAATGGGCCGAAGATGAGCAGAGCTTTCAGATTGCACCGCTTAGTCAGGCCTTCGTGGCATCAGTAGAAGGGCTT
GGCGTGTCCCTGCAGGATATCAATGCAACCGATACAGGCCTTGCAGCCGGGGAGGGCCGCGCATGA

Upstream 100 bases:

>100_bases
AGGCGTCGCGATGCCAATGCCCATGCGTCGGGCAATGGTTGCGACACCCTGACCTGGACAATGCGGCATCGCCGGACGCG
GTATGCGGATGAGGAGTGAG

Downstream 100 bases:

>100_bases
GCCTCTCGGTCCTGGCCATTGACGATTCCCGAACCATGCGGAACCTGCTGAGCGCAGCCTTGGGCCGCGTCGGCTACGAC
ATCGACCTTGCCGAAGACGG

Product: CheX protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MMTITYKLPGHLDSAVAAPLASELTDRCGQPICIDAGEVTFVGTLPLQILVAARKQWAEDEQSFQIAPLSQAFVASVEGL
GVSLQDINATDTGLAAGEGRA

Sequences:

>Translated_101_residues
MMTITYKLPGHLDSAVAAPLASELTDRCGQPICIDAGEVTFVGTLPLQILVAARKQWAEDEQSFQIAPLSQAFVASVEGL
GVSLQDINATDTGLAAGEGRA
>Mature_101_residues
MMTITYKLPGHLDSAVAAPLASELTDRCGQPICIDAGEVTFVGTLPLQILVAARKQWAEDEQSFQIAPLSQAFVASVEGL
GVSLQDINATDTGLAAGEGRA

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10529; Mature: 10529

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTITYKLPGHLDSAVAAPLASELTDRCGQPICIDAGEVTFVGTLPLQILVAARKQWAED
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEECHHHHHHHHHHHHCCCC
EQSFQIAPLSQAFVASVEGLGVSLQDINATDTGLAAGEGRA
CCCEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMTITYKLPGHLDSAVAAPLASELTDRCGQPICIDAGEVTFVGTLPLQILVAARKQWAED
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEECHHHHHHHHHHHHCCCC
EQSFQIAPLSQAFVASVEGLGVSLQDINATDTGLAAGEGRA
CCCEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA