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The map label for this gene is dppB [H]

Identifier: 89055315

GI number: 89055315

Start: 2839370

End: 2840386

Strand: Direct

Name: dppB [H]

Synonym: Jann_2824

Alternate gene names: 89055315

Gene position: 2839370-2840386 (Clockwise)

Preceding gene: 89055313

Following gene: 89055316

Centisome position: 65.76

GC content: 60.67

Gene sequence:

>1017_bases
ATGCTCAGCTATATCCTCCGCCGTGTGTTCCAATCCATCCTCGTCCTTCTGGTCGTGGGATTGGTGGCGTTCGCAATGTT
TCGCTTCGTGGGCGATCCGGTCGACACCATGCTGGGACAGGAGCGCACGATGGAAGATGTCGAGCGTCTGCGGGAGGTTC
TGGGCCTCAACAAGCCGTTCTTCCTACAATACTGGGATTTTCTGGTGCGCGCCGTGCAGGGCGATTTCGGCATCTCCTAC
CGCCAGGGCCGTCCGGTGGCCGAGATCATCGCCGAACGCCTGCCCGCCACGCTGGAACTGGCGCTGGTCTCGGGCGTCCT
CGCGCTTGGGTTCGGGATCGTTCTGGGCATCTTCACCGCTATCCGGCGTGACGGGTTCTGGGCCAATTTCATCATGAGCG
TCAGTCTTGTGGGCGTGTCGCTGCCGACCTTCCTGATCGGTGTGCTGCTGATCTATGCCTTTGGCGTCGGCCTCGACATC
CGCATCCCGTTTACCGACACCACCTTCAATACCGGCGGCATGCCCACCTTTGGGCGCGGCGATACCGGAGAGATTTTTGG
CTGGACCACCGGGTTCGCCACCTGGGACGGGGTGCAGAGCATCATCCTGCCCGCGATCACCCTTGGCCTTTACCAGATGA
CCTTGATCATGCGCCTTGTGCGCGCCGAAATGCTGGAGGTGCTGCGCGCCGATTACATCCGCTTTGCACGGGCGCGGGGC
CTGTCAGACCGGGCGATCAACTTCCGCCATGCCCTGAAGAACACCATGGTACCGGTGATCACGGTCACGGGTCTGCAACT
GGGCTCTATCATCGCGTTTGCGATCATCACCGAGACGGTGTTCCAATGGCCCGGCGTCGGGCTTCTCTTCATCAACGCGA
TCCAGTTCGTCGATATCCCCGTGATGGCCGCCTATCTGATGCTGATTTCCGTGATGTTCGTGGGCATCAATCTGGCGGTG
GACCTGCTTTATGTGGCGATTGACCCGCGCCTGCGCGTGGATGGGAAAACGACATGA

Upstream 100 bases:

>100_bases
TCCGCCAGACCTCCCCCTACGTCAACGCCGTCCCCCTCCCTGCGCCACAATTGCAACGGTCTCCCTTGACCCGCCCCGCC
CCTGCCCGCACAAACGGTGG

Downstream 100 bases:

>100_bases
GCGATACGCCCCAGACGCCCGAGCAGCCCACCCCCGCCGTGCCCGCCGCCCGCGCGCAATCGCGCCTCTACCGCGCGTGG
GACAGTGATGTCGGCTACGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLSYILRRVFQSILVLLVVGLVAFAMFRFVGDPVDTMLGQERTMEDVERLREVLGLNKPFFLQYWDFLVRAVQGDFGISY
RQGRPVAEIIAERLPATLELALVSGVLALGFGIVLGIFTAIRRDGFWANFIMSVSLVGVSLPTFLIGVLLIYAFGVGLDI
RIPFTDTTFNTGGMPTFGRGDTGEIFGWTTGFATWDGVQSIILPAITLGLYQMTLIMRLVRAEMLEVLRADYIRFARARG
LSDRAINFRHALKNTMVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVGINLAV
DLLYVAIDPRLRVDGKTT

Sequences:

>Translated_338_residues
MLSYILRRVFQSILVLLVVGLVAFAMFRFVGDPVDTMLGQERTMEDVERLREVLGLNKPFFLQYWDFLVRAVQGDFGISY
RQGRPVAEIIAERLPATLELALVSGVLALGFGIVLGIFTAIRRDGFWANFIMSVSLVGVSLPTFLIGVLLIYAFGVGLDI
RIPFTDTTFNTGGMPTFGRGDTGEIFGWTTGFATWDGVQSIILPAITLGLYQMTLIMRLVRAEMLEVLRADYIRFARARG
LSDRAINFRHALKNTMVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVGINLAV
DLLYVAIDPRLRVDGKTT
>Mature_338_residues
MLSYILRRVFQSILVLLVVGLVAFAMFRFVGDPVDTMLGQERTMEDVERLREVLGLNKPFFLQYWDFLVRAVQGDFGISY
RQGRPVAEIIAERLPATLELALVSGVLALGFGIVLGIFTAIRRDGFWANFIMSVSLVGVSLPTFLIGVLLIYAFGVGLDI
RIPFTDTTFNTGGMPTFGRGDTGEIFGWTTGFATWDGVQSIILPAITLGLYQMTLIMRLVRAEMLEVLRADYIRFARARG
LSDRAINFRHALKNTMVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVMFVGINLAV
DLLYVAIDPRLRVDGKTT

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=333, Percent_Identity=36.9369369369369, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1789965, Length=341, Percent_Identity=38.41642228739, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1789888, Length=336, Percent_Identity=36.6071428571429, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1787761, Length=339, Percent_Identity=35.9882005899705, Blast_Score=162, Evalue=4e-41,
Organism=Escherichia coli, GI1787497, Length=338, Percent_Identity=29.8816568047337, Blast_Score=157, Evalue=7e-40,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=33.6996336996337, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1788504, Length=297, Percent_Identity=25.2525252525253, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37478; Mature: 37478

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYILRRVFQSILVLLVVGLVAFAMFRFVGDPVDTMLGQERTMEDVERLREVLGLNKPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCCH
FLQYWDFLVRAVQGDFGISYRQGRPVAEIIAERLPATLELALVSGVLALGFGIVLGIFTA
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IRRDGFWANFIMSVSLVGVSLPTFLIGVLLIYAFGVGLDIRIPFTDTTFNTGGMPTFGRG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
DTGEIFGWTTGFATWDGVQSIILPAITLGLYQMTLIMRLVRAEMLEVLRADYIRFARARG
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LSDRAINFRHALKNTMVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIP
CCHHHHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VMAAYLMLISVMFVGINLAVDLLYVAIDPRLRVDGKTT
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCEECCCCCC
>Mature Secondary Structure
MLSYILRRVFQSILVLLVVGLVAFAMFRFVGDPVDTMLGQERTMEDVERLREVLGLNKPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCCH
FLQYWDFLVRAVQGDFGISYRQGRPVAEIIAERLPATLELALVSGVLALGFGIVLGIFTA
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IRRDGFWANFIMSVSLVGVSLPTFLIGVLLIYAFGVGLDIRIPFTDTTFNTGGMPTFGRG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
DTGEIFGWTTGFATWDGVQSIILPAITLGLYQMTLIMRLVRAEMLEVLRADYIRFARARG
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LSDRAINFRHALKNTMVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIP
CCHHHHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VMAAYLMLISVMFVGINLAVDLLYVAIDPRLRVDGKTT
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]