| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055314
Identifier: 89055314
GI number: 89055314
Start: 2838367
End: 2839158
Strand: Reverse
Name: 89055314
Synonym: Jann_2823
Alternate gene names: NA
Gene position: 2839158-2838367 (Counterclockwise)
Preceding gene: 89055319
Following gene: 89055309
Centisome position: 65.75
GC content: 66.04
Gene sequence:
>792_bases ATGACGAACATGACACGCATGGCCGCCGGGATCGCGCTGGCCCTCACCACGGGTCTGGGGGGCGGCAGCTTGGCAACAAC CGCACAGGCGCAGGACTTCGGCATCTCGGGCGAGATCGGCTTCGGGGCCCGGGTGCGGCAGGTCTATTTCGGCGCCGACG AGTATGGCCTGAGCCCGCTGGGGCGCGGGTCACTGGAGGCCTTTACCTTCGGGCCGATCACCTCAGGCGCGCCGGGCGTG GCGCGCGACCGGACAGGCTTTGGCCTGCGCGGCGCGGTGCGCCTGATCCCGGGCCGCTCCGCCACGGATTACGCAGAGCT TGCGGGCCTAGACGACGTGGATTTCTCGCTGGAACTGGGTCTTGGTGCCCAATACGAGGCCGAGGCCTACCGCGTCTTCG CCGATATCCGCTATGGCGTGATCGGGCATGAGGCGCTGGTCAGTGAAGTGGGCGCGGATGTGATTTTTCGCCCCACCAAT GATCTGGAAATCTCGGTCGGCCCGCGCTTGTTTTTCGGGTCGGACAGCTACACCAGCACCTATTTCGGCGTCACGGCGGC CGAGGCCGGTATGAGCGCGTTCGATGCGTTTGATGCCGACGGAGGCTTGCTGTCCATGGGGCTGGACCTGCGCGTGCAAC GCCAGTTGAGCGATGATTGGTCGATCCGTGCAGATCTTGAGATCAGCGAATTCGTCAACGCCGCCGCCGACAGCCCGATC ACGGCCCAGGGCTCCACCACCCACGCGATCTTCGGCGTGACCCTGGCGCGCCGCTTCAGCTTCGGGTTCTAG
Upstream 100 bases:
>100_bases GACCGCTATTGATTTGAGGGGCACGCCGTCCATATCGTGCCCTAGCTGCCCCGGGACCGGGGGGCTGTCCTTGTTCGGGG CACGGGATCAGAGGATACAG
Downstream 100 bases:
>100_bases ATCCGCTCCGAAGACCCGCCACCCACCGACAAAAAGAGGCCCCGCTTGCCGCCGGGCCTCCCTTTCATCTGGGCAAATAC AACTCCCCCCGGAGGGTCCA
Product: MltA-interacting MipA
Products: NA
Alternate protein names: MltA-Interacting MipA; MltA-Interacting Protein MipA; Outer Membrane Protein; MipA Family Outer Membrane Scaffold Protein
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTNMTRMAAGIALALTTGLGGGSLATTAQAQDFGISGEIGFGARVRQVYFGADEYGLSPLGRGSLEAFTFGPITSGAPGV ARDRTGFGLRGAVRLIPGRSATDYAELAGLDDVDFSLELGLGAQYEAEAYRVFADIRYGVIGHEALVSEVGADVIFRPTN DLEISVGPRLFFGSDSYTSTYFGVTAAEAGMSAFDAFDADGGLLSMGLDLRVQRQLSDDWSIRADLEISEFVNAAADSPI TAQGSTTHAIFGVTLARRFSFGF
Sequences:
>Translated_263_residues MTNMTRMAAGIALALTTGLGGGSLATTAQAQDFGISGEIGFGARVRQVYFGADEYGLSPLGRGSLEAFTFGPITSGAPGV ARDRTGFGLRGAVRLIPGRSATDYAELAGLDDVDFSLELGLGAQYEAEAYRVFADIRYGVIGHEALVSEVGADVIFRPTN DLEISVGPRLFFGSDSYTSTYFGVTAAEAGMSAFDAFDADGGLLSMGLDLRVQRQLSDDWSIRADLEISEFVNAAADSPI TAQGSTTHAIFGVTLARRFSFGF >Mature_262_residues TNMTRMAAGIALALTTGLGGGSLATTAQAQDFGISGEIGFGARVRQVYFGADEYGLSPLGRGSLEAFTFGPITSGAPGVA RDRTGFGLRGAVRLIPGRSATDYAELAGLDDVDFSLELGLGAQYEAEAYRVFADIRYGVIGHEALVSEVGADVIFRPTND LEISVGPRLFFGSDSYTSTYFGVTAAEAGMSAFDAFDADGGLLSMGLDLRVQRQLSDDWSIRADLEISEFVNAAADSPIT AQGSTTHAIFGVTLARRFSFGF
Specific function: Unknown
COG id: COG3713
COG function: function code M; Outer membrane protein V
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27609; Mature: 27478
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNMTRMAAGIALALTTGLGGGSLATTAQAQDFGISGEIGFGARVRQVYFGADEYGLSPL CCCHHHHHHCEEEEEEECCCCCCEEEECCHHHCCCCCCCCCCCEEEEEEECCHHCCCCCC GRGSLEAFTFGPITSGAPGVARDRTGFGLRGAVRLIPGRSATDYAELAGLDDVDFSLELG CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEC LGAQYEAEAYRVFADIRYGVIGHEALVSEVGADVIFRPTNDLEISVGPRLFFGSDSYTST CCCCCCHHHEEEEEEHHCCCCCHHHHHHHCCCCEEEECCCCEEEEECCEEEECCCCCCEE YFGVTAAEAGMSAFDAFDADGGLLSMGLDLRVQRQLSDDWSIRADLEISEFVNAAADSPI EEEEEHHHHCCHHHHCCCCCCCEEEECCCEEEEECCCCCCCEEECCCHHHHHHHHCCCCE TAQGSTTHAIFGVTLARRFSFGF ECCCCCCEEHHHHHHHHHHCCCC >Mature Secondary Structure TNMTRMAAGIALALTTGLGGGSLATTAQAQDFGISGEIGFGARVRQVYFGADEYGLSPL CCHHHHHHCEEEEEEECCCCCCEEEECCHHHCCCCCCCCCCCEEEEEEECCHHCCCCCC GRGSLEAFTFGPITSGAPGVARDRTGFGLRGAVRLIPGRSATDYAELAGLDDVDFSLELG CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEC LGAQYEAEAYRVFADIRYGVIGHEALVSEVGADVIFRPTNDLEISVGPRLFFGSDSYTST CCCCCCHHHEEEEEEHHCCCCCHHHHHHHCCCCEEEECCCCEEEEECCEEEECCCCCCEE YFGVTAAEAGMSAFDAFDADGGLLSMGLDLRVQRQLSDDWSIRADLEISEFVNAAADSPI EEEEEHHHHCCHHHHCCCCCCCEEEECCCEEEEECCCCCCCEEECCCHHHHHHHHCCCCE TAQGSTTHAIFGVTLARRFSFGF ECCCCCCEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA