| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89055290
Identifier: 89055290
GI number: 89055290
Start: 2813071
End: 2813541
Strand: Reverse
Name: 89055290
Synonym: Jann_2799
Alternate gene names: NA
Gene position: 2813541-2813071 (Counterclockwise)
Preceding gene: 89055291
Following gene: 89055289
Centisome position: 65.16
GC content: 64.33
Gene sequence:
>471_bases ATGCTCACCCGCCGCACGACCCTTCGATTTGGCCTCGGCCTCCTCGCCGCCTCCACCACGTTGATCGCAACCCGCGCGTC TGCCGCAGAGCCAAACATCTACCAAGACGCGGGCATCGCCATTGATGGCGCAGATGCGGTGGCGTTCTTTGGCCTGGCCG AAGAGGATGCCCCGGTCATCGGCCAAGCTGAGCACGCGCTCGACTGGAACGGGGCTATCTGGCACTTCGCGAATGCCGAG AACCGCGCGATCTTTGAGGCCAACCCCGAGGCCTATGCCCCGGCGTTCGGCGGCTATTGCGCCTATGCGGCCGCACGCGG TTATGTGGCCTCAACCGTGCCGGAGGCCTGGAGTGTCGTCGATGGTCGATTGTTCCTGAACTATTCACGTCGGATTCGCC GCCGGTGGCTGCGTGAACTTCCCGAAGCGATCGGGCGGGGCGATACCAATTACCCCGCGATGCTTGGCTGA
Upstream 100 bases:
>100_bases GGCCGTTCACAGTCTATAACAGGTCTGTCATGTCGGGTTCCTCATGGGCCTGCGGCGCGGCATATGAGGGGCACATGCAG CTCATTCCAGGGACATCATC
Downstream 100 bases:
>100_bases TCACGTTTTCGTTCAGGCCCTACAAGTAAGGCCGAAGCGGACCCATATGTTTGATAGGCGTCGCGGGTCGGAACCCTGCG AGCCCATCACTGTCCCTCGT
Product: twin-arginine translocation pathway signal sequence domain-containing protein
Products: NA
Alternate protein names: YHS Domain Protein; Tat Pathway Signal Sequence Domain Protein
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MLTRRTTLRFGLGLLAASTTLIATRASAAEPNIYQDAGIAIDGADAVAFFGLAEEDAPVIGQAEHALDWNGAIWHFANAE NRAIFEANPEAYAPAFGGYCAYAAARGYVASTVPEAWSVVDGRLFLNYSRRIRRRWLRELPEAIGRGDTNYPAMLG
Sequences:
>Translated_156_residues MLTRRTTLRFGLGLLAASTTLIATRASAAEPNIYQDAGIAIDGADAVAFFGLAEEDAPVIGQAEHALDWNGAIWHFANAE NRAIFEANPEAYAPAFGGYCAYAAARGYVASTVPEAWSVVDGRLFLNYSRRIRRRWLRELPEAIGRGDTNYPAMLG >Mature_156_residues MLTRRTTLRFGLGLLAASTTLIATRASAAEPNIYQDAGIAIDGADAVAFFGLAEEDAPVIGQAEHALDWNGAIWHFANAE NRAIFEANPEAYAPAFGGYCAYAAARGYVASTVPEAWSVVDGRLFLNYSRRIRRRWLRELPEAIGRGDTNYPAMLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16924; Mature: 16924
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRRTTLRFGLGLLAASTTLIATRASAAEPNIYQDAGIAIDGADAVAFFGLAEEDAPVI CCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC GQAEHALDWNGAIWHFANAENRAIFEANPEAYAPAFGGYCAYAAARGYVASTVPEAWSVV CCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHCCCHHHCCCHHHHHH DGRLFLNYSRRIRRRWLRELPEAIGRGDTNYPAMLG CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLTRRTTLRFGLGLLAASTTLIATRASAAEPNIYQDAGIAIDGADAVAFFGLAEEDAPVI CCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC GQAEHALDWNGAIWHFANAENRAIFEANPEAYAPAFGGYCAYAAARGYVASTVPEAWSVV CCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHCCCHHHCCCHHHHHH DGRLFLNYSRRIRRRWLRELPEAIGRGDTNYPAMLG CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA