| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055276
Identifier: 89055276
GI number: 89055276
Start: 2802921
End: 2803886
Strand: Reverse
Name: 89055276
Synonym: Jann_2785
Alternate gene names: NA
Gene position: 2803886-2802921 (Counterclockwise)
Preceding gene: 89055277
Following gene: 89055271
Centisome position: 64.94
GC content: 61.49
Gene sequence:
>966_bases ATGAGATTTGAAGACCTTTTGAAGGTGGGCGTGCTGGCTGCAACCATGGCTTTGCCCTGCGGCAGGCTCACCGCCCAGAC CGAGGCGCTGACGCTGACCAGCATGACCGTGACGCGCCATGACATCTTGCGCAACATCGATACTGAAATGGCCTCTCCCT GCTGCGCGCAACATGTCTACGAGTCCGGGGCGGAGGAGGATTTCATCTATCTGGAGGTGGATTTCGCCGTCGCCTGGAGT GATGAGCTGGAGCGTATTCAGATCTCGTCGGGTGACATCGCCCTGCAGTTCGACAGTGAAACGGACGCGCGCAGGCCGTG GGGGCGTGTCGACTTCTTCCCTGATGTCGAGCGGGGCGGCAGCAGCTTGTCCGCCCGGCGGCCCCGGGATTTCCCGGAAG AGACGGCGGGCGCCTACCTCAACCTTGTCTTCACTGCGCCGACCGCCGCCACCACCGCAACGCTGATCATCGGGGAGGGG ACGGACGCCCTGCGCCTGCCTGTCGATTTGGCTGTGCCGGTGACAGACATGCCAGCGCCTTCCAGTTTCTATGACATCAA GGTTGTCGCGATTTCGACGACCGAGGAGTTGGTGACCGAAGACCGCGTGAGCCGAAATACCATCGCCGGGCGCATGACCT CGGACATTGGGACGATCACGAGGGTCGAGATCGAGATGACGCCGTTTGTCGGCACCGATACAGACAATGAGCCCGGAGAG AACCAGGTCTTCAACCGAAACACCGCGTTTGTTCTGGTCGGCCCCGAAGGTTTGCCGCTGATCAACCTGGGCCGGGCCGC CAGCGGGTCTATCCGCAACAACTTCAGCAGCTCGATCAGTTGGGATGGGGAGGGAGCCGGGCCGACAACGACGTACACGA TGTTCTATCTCGGCTCTGGCGCCGCGGGGGAGTACCAACTGTATTTCTACGACACGTTGGTCGGTGACGTGACGCTGTCC GAGTAA
Upstream 100 bases:
>100_bases CGGCGGCTGACGACGCGACAAATTTTAGACGTGGTGGGCAGCATATCGCGCGCGGACAGTTGAACGCCCAAGACAGCCCC ATTTATGCGGAGACATTTGA
Downstream 100 bases:
>100_bases GCCCGGACAGAACACATAAGGCCCGAGCCAGGCATGTAGTGTCCGGGGTCCTCTTCCGGGGGCCGTCAATAGGTCTGGAC GGACCCGTCGGAGATCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MRFEDLLKVGVLAATMALPCGRLTAQTEALTLTSMTVTRHDILRNIDTEMASPCCAQHVYESGAEEDFIYLEVDFAVAWS DELERIQISSGDIALQFDSETDARRPWGRVDFFPDVERGGSSLSARRPRDFPEETAGAYLNLVFTAPTAATTATLIIGEG TDALRLPVDLAVPVTDMPAPSSFYDIKVVAISTTEELVTEDRVSRNTIAGRMTSDIGTITRVEIEMTPFVGTDTDNEPGE NQVFNRNTAFVLVGPEGLPLINLGRAASGSIRNNFSSSISWDGEGAGPTTTYTMFYLGSGAAGEYQLYFYDTLVGDVTLS E
Sequences:
>Translated_321_residues MRFEDLLKVGVLAATMALPCGRLTAQTEALTLTSMTVTRHDILRNIDTEMASPCCAQHVYESGAEEDFIYLEVDFAVAWS DELERIQISSGDIALQFDSETDARRPWGRVDFFPDVERGGSSLSARRPRDFPEETAGAYLNLVFTAPTAATTATLIIGEG TDALRLPVDLAVPVTDMPAPSSFYDIKVVAISTTEELVTEDRVSRNTIAGRMTSDIGTITRVEIEMTPFVGTDTDNEPGE NQVFNRNTAFVLVGPEGLPLINLGRAASGSIRNNFSSSISWDGEGAGPTTTYTMFYLGSGAAGEYQLYFYDTLVGDVTLS E >Mature_321_residues MRFEDLLKVGVLAATMALPCGRLTAQTEALTLTSMTVTRHDILRNIDTEMASPCCAQHVYESGAEEDFIYLEVDFAVAWS DELERIQISSGDIALQFDSETDARRPWGRVDFFPDVERGGSSLSARRPRDFPEETAGAYLNLVFTAPTAATTATLIIGEG TDALRLPVDLAVPVTDMPAPSSFYDIKVVAISTTEELVTEDRVSRNTIAGRMTSDIGTITRVEIEMTPFVGTDTDNEPGE NQVFNRNTAFVLVGPEGLPLINLGRAASGSIRNNFSSSISWDGEGAGPTTTYTMFYLGSGAAGEYQLYFYDTLVGDVTLS E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34863; Mature: 34863
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEDLLKVGVLAATMALPCGRLTAQTEALTLTSMTVTRHDILRNIDTEMASPCCAQHVY CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCHHHCCHHHHHHHH ESGAEEDFIYLEVDFAVAWSDELERIQISSGDIALQFDSETDARRPWGRVDFFPDVERGG HCCCCCCEEEEEEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHCCC SSLSARRPRDFPEETAGAYLNLVFTAPTAATTATLIIGEGTDALRLPVDLAVPVTDMPAP CCCCCCCCCCCCHHHCCEEEEEEEECCCCCCEEEEEEECCCCEEEECEEEEECCCCCCCC SSFYDIKVVAISTTEELVTEDRVSRNTIAGRMTSDIGTITRVEIEMTPFVGTDTDNEPGE CCEEEEEEEEEECHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEEEEECEECCCCCCCCCC NQVFNRNTAFVLVGPEGLPLINLGRAASGSIRNNFSSSISWDGEGAGPTTTYTMFYLGSG CCEECCCEEEEEECCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEEEEECC AAGEYQLYFYDTLVGDVTLSE CCCEEEEEEEEEEECEEEECC >Mature Secondary Structure MRFEDLLKVGVLAATMALPCGRLTAQTEALTLTSMTVTRHDILRNIDTEMASPCCAQHVY CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCHHHCCHHHHHHHH ESGAEEDFIYLEVDFAVAWSDELERIQISSGDIALQFDSETDARRPWGRVDFFPDVERGG HCCCCCCEEEEEEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHCCC SSLSARRPRDFPEETAGAYLNLVFTAPTAATTATLIIGEGTDALRLPVDLAVPVTDMPAP CCCCCCCCCCCCHHHCCEEEEEEEECCCCCCEEEEEEECCCCEEEECEEEEECCCCCCCC SSFYDIKVVAISTTEELVTEDRVSRNTIAGRMTSDIGTITRVEIEMTPFVGTDTDNEPGE CCEEEEEEEEEECHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEEEEECEECCCCCCCCCC NQVFNRNTAFVLVGPEGLPLINLGRAASGSIRNNFSSSISWDGEGAGPTTTYTMFYLGSG CCEECCCEEEEEECCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEEEEECC AAGEYQLYFYDTLVGDVTLSE CCCEEEEEEEEEEECEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA