| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055267
Identifier: 89055267
GI number: 89055267
Start: 2791348
End: 2791902
Strand: Reverse
Name: 89055267
Synonym: Jann_2776
Alternate gene names: NA
Gene position: 2791902-2791348 (Counterclockwise)
Preceding gene: 89055268
Following gene: 89055265
Centisome position: 64.66
GC content: 61.62
Gene sequence:
>555_bases ATGTTGCGCCCCTTGACCGCCCTGGCCATGCTGCCGTTTCTTGCATCGCAGGTCATCGCCCAGGATTTCCTGACCCGCGA TGAGGTCGTGGCGCATATGGATGCGTCGGTCTTTTGCTACTACCCCGATACGCGCGTGTCCTGCGCATGGGCCGAGCTCT ATACCGAGCAGAACGAGGATCACGCGATTCTGATCACAGCCTCCGCCACTTGGGATTTCCCGATGGAAATCGCTGAGTAT CGGATCGATTGGCGCGGTGACGCGCTCTGCATTCCATTTGAAGACCAGGGCCTGCGGGCGATGTGGCAGTCCGAAGGGTA TCGGTTTCCGTTCAACCTGGAAGGTCTGACCCCACTGCCCGACGACGATTTGCCCGCCCGTCGGGACGAATTGCGCGAAG ACGCGCCCCGCGAATTCTGCTTCCAATACACTGTTGATCCCGACACGCCCGGCCAGCTCAGGCAGCATGTGTTCCGGGAC GGGGTCTGGGACGAGGAGCTGGACCCCATCGCCCTCATCCCGCGCTTTTCCAGCGGTGTCGCGGTCAGGCCCTAA
Upstream 100 bases:
>100_bases AGAAGAGGGGGGAGAGGTTCCCTTCTGATCACCTCTCGACCAAACCCCGTGCGCACACTAGGGTTGCCGTTCAAGCCCTT GATCTGACGCGGAGACATCT
Downstream 100 bases:
>100_bases TCTGCCGACAGCACCATTGGGTAGAGCGAGAGGACCAGCAGGGCGGCCATCGTCCAGTTGAATGTGGTCAGGCGTCCGGG CCCGTCAAGCCAGCGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MLRPLTALAMLPFLASQVIAQDFLTRDEVVAHMDASVFCYYPDTRVSCAWAELYTEQNEDHAILITASATWDFPMEIAEY RIDWRGDALCIPFEDQGLRAMWQSEGYRFPFNLEGLTPLPDDDLPARRDELREDAPREFCFQYTVDPDTPGQLRQHVFRD GVWDEELDPIALIPRFSSGVAVRP
Sequences:
>Translated_184_residues MLRPLTALAMLPFLASQVIAQDFLTRDEVVAHMDASVFCYYPDTRVSCAWAELYTEQNEDHAILITASATWDFPMEIAEY RIDWRGDALCIPFEDQGLRAMWQSEGYRFPFNLEGLTPLPDDDLPARRDELREDAPREFCFQYTVDPDTPGQLRQHVFRD GVWDEELDPIALIPRFSSGVAVRP >Mature_184_residues MLRPLTALAMLPFLASQVIAQDFLTRDEVVAHMDASVFCYYPDTRVSCAWAELYTEQNEDHAILITASATWDFPMEIAEY RIDWRGDALCIPFEDQGLRAMWQSEGYRFPFNLEGLTPLPDDDLPARRDELREDAPREFCFQYTVDPDTPGQLRQHVFRD GVWDEELDPIALIPRFSSGVAVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21206; Mature: 21206
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPLTALAMLPFLASQVIAQDFLTRDEVVAHMDASVFCYYPDTRVSCAWAELYTEQNED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCC HAILITASATWDFPMEIAEYRIDWRGDALCIPFEDQGLRAMWQSEGYRFPFNLEGLTPLP CEEEEEECCCCCCCHHHHHEEECCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCC DDDLPARRDELREDAPREFCFQYTVDPDTPGQLRQHVFRDGVWDEELDPIALIPRFSSGV CCCCCCHHHHHHHCCCHHEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC AVRP EECC >Mature Secondary Structure MLRPLTALAMLPFLASQVIAQDFLTRDEVVAHMDASVFCYYPDTRVSCAWAELYTEQNED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCC HAILITASATWDFPMEIAEYRIDWRGDALCIPFEDQGLRAMWQSEGYRFPFNLEGLTPLP CEEEEEECCCCCCCHHHHHEEECCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCC DDDLPARRDELREDAPREFCFQYTVDPDTPGQLRQHVFRDGVWDEELDPIALIPRFSSGV CCCCCCHHHHHHHCCCHHEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC AVRP EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA