Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055264

Identifier: 89055264

GI number: 89055264

Start: 2789478

End: 2789852

Strand: Direct

Name: 89055264

Synonym: Jann_2773

Alternate gene names: NA

Gene position: 2789478-2789852 (Clockwise)

Preceding gene: 89055235

Following gene: 89055266

Centisome position: 64.6

GC content: 55.73

Gene sequence:

>375_bases
ATGCGCACGCTGCATAGCAGCATTTCCGTATCGTCCATTGTGCATGTGCAGCATTCGCTTATCTTCAGTCACAACAGAAC
GGTAACAAAGAACCACCCGGGCCGAAGGACGGACAGAACTCTCCTCGCCCAAACGATGAAATTGAGGATTACCATGGCCT
ATATCACAGGCAACCGCACATACACCACGCCCCTCCTTCAACGCGTCGTCGCGATCCGCGATACCGCGATCCAAGCTTAC
ACCAACTGGCGCGTGTACCGGAACACTCTGAACGAGCTGCAGGACCTTTCAGCCCGCGAGATGGCTGATCTGGGGATCAA
CCCCTCGATGATCCAGCGCATCGCTCTGGAAGCAGCTTACGGCAAACAGGCCTGA

Upstream 100 bases:

>100_bases
AAGAAAACTCCACCGAAGAACAGCTTGAATTGACGGTCAGCGAAGGCGCCTCCTGCGATTTTCATGGGATTAACCCTAGG
GAAAGTAACGAAAATGTGTC

Downstream 100 bases:

>100_bases
GCGACACACGACATACCGGCCCCCGTCCTCCCACGGGGTATCCGGGCCAGCGGGCTGCGCTCTACCCTCCCTTGGGCGCG
CCCGCCTCTCCATACCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MRTLHSSISVSSIVHVQHSLIFSHNRTVTKNHPGRRTDRTLLAQTMKLRITMAYITGNRTYTTPLLQRVVAIRDTAIQAY
TNWRVYRNTLNELQDLSAREMADLGINPSMIQRIALEAAYGKQA

Sequences:

>Translated_124_residues
MRTLHSSISVSSIVHVQHSLIFSHNRTVTKNHPGRRTDRTLLAQTMKLRITMAYITGNRTYTTPLLQRVVAIRDTAIQAY
TNWRVYRNTLNELQDLSAREMADLGINPSMIQRIALEAAYGKQA
>Mature_124_residues
MRTLHSSISVSSIVHVQHSLIFSHNRTVTKNHPGRRTDRTLLAQTMKLRITMAYITGNRTYTTPLLQRVVAIRDTAIQAY
TNWRVYRNTLNELQDLSAREMADLGINPSMIQRIALEAAYGKQA

Specific function: Unknown

COG id: COG5457

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14152; Mature: 14152

Theoretical pI: Translated: 11.37; Mature: 11.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLHSSISVSSIVHVQHSLIFSHNRTVTKNHPGRRTDRTLLAQTMKLRITMAYITGNRT
CCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHEEEEEEEECCCE
YTTPLLQRVVAIRDTAIQAYTNWRVYRNTLNELQDLSAREMADLGINPSMIQRIALEAAY
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHC
GKQA
CCCC
>Mature Secondary Structure
MRTLHSSISVSSIVHVQHSLIFSHNRTVTKNHPGRRTDRTLLAQTMKLRITMAYITGNRT
CCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHEEEEEEEECCCE
YTTPLLQRVVAIRDTAIQAYTNWRVYRNTLNELQDLSAREMADLGINPSMIQRIALEAAY
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHC
GKQA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA