| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055246
Identifier: 89055246
GI number: 89055246
Start: 2771796
End: 2772083
Strand: Reverse
Name: 89055246
Synonym: Jann_2755
Alternate gene names: NA
Gene position: 2772083-2771796 (Counterclockwise)
Preceding gene: 89055247
Following gene: 89055245
Centisome position: 64.2
GC content: 58.68
Gene sequence:
>288_bases ATGGATTTGTTTACGGTCTTTGTCGGTTTCGGGTCCATCGGTGGTCTGCTTGCGGGCTATCTGATGGGCCGGTTCGCGAG CCCGATCAGTGTCCTTGCGCTCTGGGCGATATGCGCCGCAGCCCTCATCGCCTATGCCAACTGGCTTGATGCTGGCAGCG GGCCCGACAGCGTGGAGCCAATTCTGGTTCTCTATGGTGTTCTCATGCCGTTCAGTGCCTGTGTGATTGTTGCAAGTCTG ATCGGCACCGTCGTGCGGAAGGTCCTCGGTGCCAGAGGAGTGTCATGA
Upstream 100 bases:
>100_bases TGGCGGGCATGTCCGTGTTGCGCTGGCCCCTGATCCGGGCAGGTCAACGCCTGCGGCGGGCCGTCGGCAAAACCGGGACC AGCGACACCGAGGTGAGCTG
Downstream 100 bases:
>100_bases CGCAAGACTTACCCACGCCCCGTGGCCGGTTGACGCCGGACAAAGACCTGTCCGGCCTTACGTGGCTGCGCGTCGGCGGT CCGGCGGACTGGCTGTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MDLFTVFVGFGSIGGLLAGYLMGRFASPISVLALWAICAAALIAYANWLDAGSGPDSVEPILVLYGVLMPFSACVIVASL IGTVVRKVLGARGVS
Sequences:
>Translated_95_residues MDLFTVFVGFGSIGGLLAGYLMGRFASPISVLALWAICAAALIAYANWLDAGSGPDSVEPILVLYGVLMPFSACVIVASL IGTVVRKVLGARGVS >Mature_95_residues MDLFTVFVGFGSIGGLLAGYLMGRFASPISVLALWAICAAALIAYANWLDAGSGPDSVEPILVLYGVLMPFSACVIVASL IGTVVRKVLGARGVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9750; Mature: 9750
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLFTVFVGFGSIGGLLAGYLMGRFASPISVLALWAICAAALIAYANWLDAGSGPDSVEP CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ILVLYGVLMPFSACVIVASLIGTVVRKVLGARGVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDLFTVFVGFGSIGGLLAGYLMGRFASPISVLALWAICAAALIAYANWLDAGSGPDSVEP CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ILVLYGVLMPFSACVIVASLIGTVVRKVLGARGVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA