Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89055228

Identifier: 89055228

GI number: 89055228

Start: 2751193

End: 2751504

Strand: Direct

Name: 89055228

Synonym: Jann_2737

Alternate gene names: NA

Gene position: 2751193-2751504 (Clockwise)

Preceding gene: 89055227

Following gene: 89055229

Centisome position: 63.71

GC content: 53.53

Gene sequence:

>312_bases
ATGGCAAAACATGGCCGATCCTCACGATTATTTGAGTTTGTTAACACTTTGTTTGTGAACGCGCGCCATGTTAGGTGGAT
GAACGGGACATTGCACCTTCTCCTGGCCGGGTTCACAGCTGGCATTCTCGCCGCCGCGATGGCTTTCGTTGCCGATTTCA
GCTGGCTTGCAGCCTTCGGCTTCTACGTTCTGGGCGGGAATATCGGTCTGCTTTTTACCGCTATGCTGATGGCCCGGGCA
AGGTCCGATACGGATATTGAAGCCCACACGATTGAGGCCTATAGCGCAAAGGCTTGCACTGAAGAGGGTTGA

Upstream 100 bases:

>100_bases
AAGCCAGGAAATCGCCCGCCGTATCGAGGGTCGGCCGGCGCCCGCGGGCGCTGCAGATCCCTGCGCGGGTCTGTAGCTGT
GAGCCGAATACCGCCGGGCG

Downstream 100 bases:

>100_bases
CGCGCCTGCAAACGGCGCCGTTTCTCCACCCGATTGACGCGGCCCGCCGCCGCGGTCATCGTCCGGTCATGATCCATCCA
AATTCAGATGCCATCTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MAKHGRSSRLFEFVNTLFVNARHVRWMNGTLHLLLAGFTAGILAAAMAFVADFSWLAAFGFYVLGGNIGLLFTAMLMARA
RSDTDIEAHTIEAYSAKACTEEG

Sequences:

>Translated_103_residues
MAKHGRSSRLFEFVNTLFVNARHVRWMNGTLHLLLAGFTAGILAAAMAFVADFSWLAAFGFYVLGGNIGLLFTAMLMARA
RSDTDIEAHTIEAYSAKACTEEG
>Mature_102_residues
AKHGRSSRLFEFVNTLFVNARHVRWMNGTLHLLLAGFTAGILAAAMAFVADFSWLAAFGFYVLGGNIGLLFTAMLMARAR
SDTDIEAHTIEAYSAKACTEEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11232; Mature: 11101

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHGRSSRLFEFVNTLFVNARHVRWMNGTLHLLLAGFTAGILAAAMAFVADFSWLAAFG
CCCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYVLGGNIGLLFTAMLMARARSDTDIEAHTIEAYSAKACTEEG
HHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKHGRSSRLFEFVNTLFVNARHVRWMNGTLHLLLAGFTAGILAAAMAFVADFSWLAAFG
CCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYVLGGNIGLLFTAMLMARARSDTDIEAHTIEAYSAKACTEEG
HHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA