| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is aat
Identifier: 89055208
GI number: 89055208
Start: 2726033
End: 2726671
Strand: Direct
Name: aat
Synonym: Jann_2717
Alternate gene names: 89055208
Gene position: 2726033-2726671 (Clockwise)
Preceding gene: 89055207
Following gene: 89055212
Centisome position: 63.13
GC content: 61.19
Gene sequence:
>639_bases ATGGCGCATGACATGTATCCCCAGCCACGCCCCCTTCTTACGCCGGACCTGATGATCCGCGCCTATGCCGCTGGCATTTT CCCGATGTCCGAGGGCGCTGACAATCCAGAGGTGTTCTGGGTTGACCCTCAGCGGCGCGGCGTCTTCCCGCTCAACGGGT TCCATATCTCTCGCACGCTGCGGCGGCAGATCAGGTTTGGCGGCTACAGCGTTCATATCAATCGGGATTTCGCTGGCGTT TTAGATGGGTGTGCGGATCGGGAACCCACCTGGATCAATGCTGATCTGACCGCCTGTTACCTCGCGCTCCATGCCCAGGG CCTGGCCCATTCGGTTGAGATCTGGGACGATGAGGGGCTGGCCGGAGCGGTTTTCGGCGTGACCTTGGGGGCAGCATTTT TTGGCGAAAGCATGTTTTCGCGTCGCACCGGGGGGTCCAAACTGGCCCTCGCCCATCTGATCCACCGCCTGCGCGCTGGC GGCTTTACGCTGTTTGACACGCAGTTTGTGACCGACCACCTCATGAGCCTTGGCGCGTTTGAGCTGCCCCGGTCGGACTA CCGGGCCGAGTTGAGCCATGCGTTGCAACTACCTGCCGATTTCATGTCATTGCCGGAAGACGTCCCGCTGGTCGTCTAG
Upstream 100 bases:
>100_bases CTCTGTTAATGCCGGGTTAAGGGCAGAGAGAAAAATCGAAACATCTACGTTTTGCCAAGTTATTATGGGCTTTTTTACGC AGAAGGCCTAGGTGTCATTT
Downstream 100 bases:
>100_bases GTTACGCCGAACAGCCCAAAACCCAGACGTCGTAGCGGGAATGCTCCAACGCATTCAGGGCCGGGCTGGACGCGATCATC CATCCGTCAAAAAGCGTCTC
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MAHDMYPQPRPLLTPDLMIRAYAAGIFPMSEGADNPEVFWVDPQRRGVFPLNGFHISRTLRRQIRFGGYSVHINRDFAGV LDGCADREPTWINADLTACYLALHAQGLAHSVEIWDDEGLAGAVFGVTLGAAFFGESMFSRRTGGSKLALAHLIHRLRAG GFTLFDTQFVTDHLMSLGAFELPRSDYRAELSHALQLPADFMSLPEDVPLVV
Sequences:
>Translated_212_residues MAHDMYPQPRPLLTPDLMIRAYAAGIFPMSEGADNPEVFWVDPQRRGVFPLNGFHISRTLRRQIRFGGYSVHINRDFAGV LDGCADREPTWINADLTACYLALHAQGLAHSVEIWDDEGLAGAVFGVTLGAAFFGESMFSRRTGGSKLALAHLIHRLRAG GFTLFDTQFVTDHLMSLGAFELPRSDYRAELSHALQLPADFMSLPEDVPLVV >Mature_211_residues AHDMYPQPRPLLTPDLMIRAYAAGIFPMSEGADNPEVFWVDPQRRGVFPLNGFHISRTLRRQIRFGGYSVHINRDFAGVL DGCADREPTWINADLTACYLALHAQGLAHSVEIWDDEGLAGAVFGVTLGAAFFGESMFSRRTGGSKLALAHLIHRLRAGG FTLFDTQFVTDHLMSLGAFELPRSDYRAELSHALQLPADFMSLPEDVPLVV
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=193, Percent_Identity=39.8963730569948, Blast_Score=129, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_JANSC (Q28NS8)
Other databases:
- EMBL: CP000264 - RefSeq: YP_510659.1 - ProteinModelPortal: Q28NS8 - SMR: Q28NS8 - STRING: Q28NS8 - GeneID: 3935181 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_2717 - eggNOG: COG2360 - HOGENOM: HBG485363 - OMA: GEPILWW - PhylomeDB: Q28NS8 - ProtClustDB: PRK00301 - BioCyc: JSP290400:JANN_2717-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 23473; Mature: 23342
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDMYPQPRPLLTPDLMIRAYAAGIFPMSEGADNPEVFWVDPQRRGVFPLNGFHISRTL CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHH RRQIRFGGYSVHINRDFAGVLDGCADREPTWINADLTACYLALHAQGLAHSVEIWDDEGL HHHHHCCCEEEEECCCHHHHHHCCCCCCCCEEECHHHHHHHHHHHHCCCCEEEEECCCCC AGAVFGVTLGAAFFGESMFSRRTGGSKLALAHLIHRLRAGGFTLFDTQFVTDHLMSLGAF CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCC ELPRSDYRAELSHALQLPADFMSLPEDVPLVV CCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC >Mature Secondary Structure AHDMYPQPRPLLTPDLMIRAYAAGIFPMSEGADNPEVFWVDPQRRGVFPLNGFHISRTL CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHH RRQIRFGGYSVHINRDFAGVLDGCADREPTWINADLTACYLALHAQGLAHSVEIWDDEGL HHHHHCCCEEEEECCCHHHHHHCCCCCCCCEEECHHHHHHHHHHHHCCCCEEEEECCCCC AGAVFGVTLGAAFFGESMFSRRTGGSKLALAHLIHRLRAGGFTLFDTQFVTDHLMSLGAF CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCC ELPRSDYRAELSHALQLPADFMSLPEDVPLVV CCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA