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The map label for this gene is amaB [H]

Identifier: 89055198

GI number: 89055198

Start: 2716676

End: 2717938

Strand: Reverse

Name: amaB [H]

Synonym: Jann_2707

Alternate gene names: 89055198

Gene position: 2717938-2716676 (Counterclockwise)

Preceding gene: 89055199

Following gene: 89055197

Centisome position: 62.94

GC content: 61.36

Gene sequence:

>1263_bases
ATGGCAGCAACGACGTCCGCCCCGGCAGAAAACATGAAAATCGACGGCGCCCGTCTGTGGGACAGCCTGATGGAGATGGC
CAAGATCGGCCCCGGCATCGCGGGCGGCAATAACCGTCAGACGCTAACCGATGAGGATGCCGAAGGACGCGCGCTGTTCC
AGAAATGGTGCGATGATGCGGGCTGCACCATGGGTGTGGATCAGATGGGCAACATGTTCGCGCGACGCGAGGGGACCGAC
CCTGACGCCTTGCCTGTTTACGTGGGCAGCCACCTGGATACGCAGCCCACGGGGGGCAAGTATGACGGTGTGTTGGGCGT
TCTGGGTGGCCTCGAAATCATTCGCACAATGAATGACTTGGGGATCAAGACCAAGCATCCCATCGTGGTCACGAACTGGA
CCAATGAGGAGGGGACGCGCTACGCGCCTGCCATGCTCGCCTCCGGTGTATTCGCCGGGAAACACACGCAGGACTGGGCC
TATGACAAGGTCGACGCCCAGGGAAAGCGGTTCGGGGATGAGCTGGAGCGGATCGGTTGGAAAGGCGACGAAGAAGTGGG
TGCCCGCAAGATGCACGCCTTCTTTGAGCTGCACATCGAACAGGGCCCAATCCTGGAGGCCGAGGGCAAGGATGTGGGCG
TCGTCACCCACGGACAGGGCCTGCGCTGGATCGAATGCACGATCACCGGCAAGGAAAGCCACACCGGCTCCACCCCCATG
CACATGCGGAAAAACGCAGGCCGCGGCCTCGCGCTGGTCACGGAGCTGGTCCATGAGATCGCGATGAAGAACCAGCCCAA
TGCCGTGGGCGCGATTGGGCATATCGACGTCTACCCCAACTCTCGCAACATCATTCCGGGCAAGGTCGTCTTCACCGTCG
ATATGCGCACGCACATTCTCGACAAGCTGGAGGGCATGGTGGCCGAGCTGATGGAGCGCGCGCCAAAACTCTGCGCCGAC
ATCGGCGTTTCGTTTGAGGCCGAGATCGTCGGTCAGTTCGATCCGCCCGCCTTTGACGACAATTGTGTCACGGCCATCCG
ACAAGCTGCGGAAAGGCTTGGGCTTTCTCACATGGATATCGTATCCGGGGCAGGGCACGATGCGTGCTGGATCAACGATG
TGGCCCCGACGGCGATGGTGATGTGTCCCTGCGTGGACGGCTTAAGCCACAACGAGGCCGAAGAGATTAGCCCGGAATGG
GCGGCGGCCGGTGCGAATGTCCTGTTCCATGCGGTCGTGGAAACGGCGGAGATAGTGACATGA

Upstream 100 bases:

>100_bases
ACGGTGTATCGCCGCGATGAGGGGGTCGAGCACAATGTGATCAACGGCGGCACAGCACCCATGACCTTCATCGAGACCGA
ACTGAAGTAAGGACCCACCC

Downstream 100 bases:

>100_bases
ATTCAAAGATTTGGCTGGCTTTAGGTGCCACACTCGCCTTGACGGCCTGTGTGCAACCCACGCCCGAAGGGCAAACCGAG
GTGTTGCCGCCCGAAGTCCT

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MAATTSAPAENMKIDGARLWDSLMEMAKIGPGIAGGNNRQTLTDEDAEGRALFQKWCDDAGCTMGVDQMGNMFARREGTD
PDALPVYVGSHLDTQPTGGKYDGVLGVLGGLEIIRTMNDLGIKTKHPIVVTNWTNEEGTRYAPAMLASGVFAGKHTQDWA
YDKVDAQGKRFGDELERIGWKGDEEVGARKMHAFFELHIEQGPILEAEGKDVGVVTHGQGLRWIECTITGKESHTGSTPM
HMRKNAGRGLALVTELVHEIAMKNQPNAVGAIGHIDVYPNSRNIIPGKVVFTVDMRTHILDKLEGMVAELMERAPKLCAD
IGVSFEAEIVGQFDPPAFDDNCVTAIRQAAERLGLSHMDIVSGAGHDACWINDVAPTAMVMCPCVDGLSHNEAEEISPEW
AAAGANVLFHAVVETAEIVT

Sequences:

>Translated_420_residues
MAATTSAPAENMKIDGARLWDSLMEMAKIGPGIAGGNNRQTLTDEDAEGRALFQKWCDDAGCTMGVDQMGNMFARREGTD
PDALPVYVGSHLDTQPTGGKYDGVLGVLGGLEIIRTMNDLGIKTKHPIVVTNWTNEEGTRYAPAMLASGVFAGKHTQDWA
YDKVDAQGKRFGDELERIGWKGDEEVGARKMHAFFELHIEQGPILEAEGKDVGVVTHGQGLRWIECTITGKESHTGSTPM
HMRKNAGRGLALVTELVHEIAMKNQPNAVGAIGHIDVYPNSRNIIPGKVVFTVDMRTHILDKLEGMVAELMERAPKLCAD
IGVSFEAEIVGQFDPPAFDDNCVTAIRQAAERLGLSHMDIVSGAGHDACWINDVAPTAMVMCPCVDGLSHNEAEEISPEW
AAAGANVLFHAVVETAEIVT
>Mature_419_residues
AATTSAPAENMKIDGARLWDSLMEMAKIGPGIAGGNNRQTLTDEDAEGRALFQKWCDDAGCTMGVDQMGNMFARREGTDP
DALPVYVGSHLDTQPTGGKYDGVLGVLGGLEIIRTMNDLGIKTKHPIVVTNWTNEEGTRYAPAMLASGVFAGKHTQDWAY
DKVDAQGKRFGDELERIGWKGDEEVGARKMHAFFELHIEQGPILEAEGKDVGVVTHGQGLRWIECTITGKESHTGSTPMH
MRKNAGRGLALVTELVHEIAMKNQPNAVGAIGHIDVYPNSRNIIPGKVVFTVDMRTHILDKLEGMVAELMERAPKLCADI
GVSFEAEIVGQFDPPAFDDNCVTAIRQAAERLGLSHMDIVSGAGHDACWINDVAPTAMVMCPCVDGLSHNEAEEISPEWA
AAGANVLFHAVVETAEIVT

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=393, Percent_Identity=28.7531806615776, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45329; Mature: 45198

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATTSAPAENMKIDGARLWDSLMEMAKIGPGIAGGNNRQTLTDEDAEGRALFQKWCDDA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
GCTMGVDQMGNMFARREGTDPDALPVYVGSHLDTQPTGGKYDGVLGVLGGLEIIRTMNDL
CCEECHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GIKTKHPIVVTNWTNEEGTRYAPAMLASGVFAGKHTQDWAYDKVDAQGKRFGDELERIGW
CCCCCCCEEEEECCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
KGDEEVGARKMHAFFELHIEQGPILEAEGKDVGVVTHGQGLRWIECTITGKESHTGSTPM
CCCHHHHHHHHEEEHEEEECCCCEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCH
HMRKNAGRGLALVTELVHEIAMKNQPNAVGAIGHIDVYPNSRNIIPGKVVFTVDMRTHIL
HHHHCCCCCHHHHHHHHHHHHHCCCCCCEECEEEEEECCCCCCCCCCEEEEEECHHHHHH
DKLEGMVAELMERAPKLCADIGVSFEAEIVGQFDPPAFDDNCVTAIRQAAERLGLSHMDI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHH
VSGAGHDACWINDVAPTAMVMCPCVDGLSHNEAEEISPEWAAAGANVLFHAVVETAEIVT
HCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AATTSAPAENMKIDGARLWDSLMEMAKIGPGIAGGNNRQTLTDEDAEGRALFQKWCDDA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
GCTMGVDQMGNMFARREGTDPDALPVYVGSHLDTQPTGGKYDGVLGVLGGLEIIRTMNDL
CCEECHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GIKTKHPIVVTNWTNEEGTRYAPAMLASGVFAGKHTQDWAYDKVDAQGKRFGDELERIGW
CCCCCCCEEEEECCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
KGDEEVGARKMHAFFELHIEQGPILEAEGKDVGVVTHGQGLRWIECTITGKESHTGSTPM
CCCHHHHHHHHEEEHEEEECCCCEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCH
HMRKNAGRGLALVTELVHEIAMKNQPNAVGAIGHIDVYPNSRNIIPGKVVFTVDMRTHIL
HHHHCCCCCHHHHHHHHHHHHHCCCCCCEECEEEEEECCCCCCCCCCEEEEEECHHHHHH
DKLEGMVAELMERAPKLCADIGVSFEAEIVGQFDPPAFDDNCVTAIRQAAERLGLSHMDI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHH
VSGAGHDACWINDVAPTAMVMCPCVDGLSHNEAEEISPEWAAAGANVLFHAVVETAEIVT
HCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]