| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is tauC [C]
Identifier: 89055191
GI number: 89055191
Start: 2711030
End: 2711980
Strand: Reverse
Name: tauC [C]
Synonym: Jann_2700
Alternate gene names: 89055191
Gene position: 2711980-2711030 (Counterclockwise)
Preceding gene: 89055192
Following gene: 89055190
Centisome position: 62.81
GC content: 64.25
Gene sequence:
>951_bases ATGAGCGCTGTGGATCCGGGGACACTGCCTGATCGGCGGCTTTGGTTTGGGCTTCTCTGCCTTGCGGGGGGGATCGCCGT ATTTTGGCTGGCCACGGCGGCAGAGGCCGCGCCGGGCGTGGCACTTCTAGTGTTCTGGGCCCTGATGAGCGGTGGCGCGG TTCTGGTGGCGACCCATGTGGCGCGCTGGGTGGGGGCGGCGCTGCCGCTGGCATTGGGCGCGACGATCCTGGGCGTGTGG GAGATGGCCGTCCATATCTACGATATTTCGCCGGTGATCCTGCCGGCTCCGTCCTCCATCGCGGCGGCGTTCGCGGCGAA CACCGATATCCTCTGGGCGGATTTTGTGCAGACGATCCTGCGTGGCGCATTGGTGGGATATGTATTGGGCTGCGGTGCGG CGATTCTGACGGCTTTGGCGATTGACCGGTCCGTGTTCCTGCAAAAGGGCCTGCTGCCGGTGGGCAATTTCATCGCGGCA TTGCCGATCGTGGGCACCGCGCCGATCCTGGTGATGTGGTACGGGTTTGGGCCGTCATCGAAGGTGGCCGTGGTCGTGGC GATGGTGTTCTTCCCGATGCTGGTCAACGCGGTGCAGGGTCTGAAGACCAGCAACGCGATCCAGCGCGACCTGATGCACA CCTATGCGGCCAGCTACGGGCAAACGCTGGTCAAGCTGCGCCTGCCCACGGCGTTGCCGTTTCTGTTCAATGGGTTGAAG ATCTGCACAACCCTTGCGCTGATCGGGGCGATTGTGGCTGAATTTTTCGGCTCCCCCACGGTGGGGATGGGCTTTCGGAT CAAGATCGAGGTCGGGCGGTTGGCCATGGATATGGTCTGGGCCGAGATTACGGTCGCGGCCCTGGCGGGGTCGGGATTGT ACGGGCTGATGGCGCTGCTGGAGCGGCGACTGACGTTCTGGCACCCGTCGCAAAGGCGCCTGCGCGCTTGA
Upstream 100 bases:
>100_bases TGGCAGACCGAGCGCATGGGGCTGAGGTGGATCGGGCCGGGAGCCATGTTGGCGAGCGGCGGGTGAGGGTAACGTATATG GCGACCGGGGGCGCGGGGCG
Downstream 100 bases:
>100_bases AGCTCAGGCGAGGGGCTGACACGATGAGACGGACAAAAAATACGTAAAAACGGATCAACAGGAAGGAAACGAAATGAAAC ATCTGACTTTTGGCGCCGCG
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSAVDPGTLPDRRLWFGLLCLAGGIAVFWLATAAEAAPGVALLVFWALMSGGAVLVATHVARWVGAALPLALGATILGVW EMAVHIYDISPVILPAPSSIAAAFAANTDILWADFVQTILRGALVGYVLGCGAAILTALAIDRSVFLQKGLLPVGNFIAA LPIVGTAPILVMWYGFGPSSKVAVVVAMVFFPMLVNAVQGLKTSNAIQRDLMHTYAASYGQTLVKLRLPTALPFLFNGLK ICTTLALIGAIVAEFFGSPTVGMGFRIKIEVGRLAMDMVWAEITVAALAGSGLYGLMALLERRLTFWHPSQRRLRA
Sequences:
>Translated_316_residues MSAVDPGTLPDRRLWFGLLCLAGGIAVFWLATAAEAAPGVALLVFWALMSGGAVLVATHVARWVGAALPLALGATILGVW EMAVHIYDISPVILPAPSSIAAAFAANTDILWADFVQTILRGALVGYVLGCGAAILTALAIDRSVFLQKGLLPVGNFIAA LPIVGTAPILVMWYGFGPSSKVAVVVAMVFFPMLVNAVQGLKTSNAIQRDLMHTYAASYGQTLVKLRLPTALPFLFNGLK ICTTLALIGAIVAEFFGSPTVGMGFRIKIEVGRLAMDMVWAEITVAALAGSGLYGLMALLERRLTFWHPSQRRLRA >Mature_315_residues SAVDPGTLPDRRLWFGLLCLAGGIAVFWLATAAEAAPGVALLVFWALMSGGAVLVATHVARWVGAALPLALGATILGVWE MAVHIYDISPVILPAPSSIAAAFAANTDILWADFVQTILRGALVGYVLGCGAAILTALAIDRSVFLQKGLLPVGNFIAAL PIVGTAPILVMWYGFGPSSKVAVVVAMVFFPMLVNAVQGLKTSNAIQRDLMHTYAASYGQTLVKLRLPTALPFLFNGLKI CTTLALIGAIVAEFFGSPTVGMGFRIKIEVGRLAMDMVWAEITVAALAGSGLYGLMALLERRLTFWHPSQRRLRA
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=246, Percent_Identity=28.4552845528455, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI87081802, Length=257, Percent_Identity=26.0700389105058, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33418; Mature: 33287
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVDPGTLPDRRLWFGLLCLAGGIAVFWLATAAEAAPGVALLVFWALMSGGAVLVATHV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH ARWVGAALPLALGATILGVWEMAVHIYDISPVILPAPSSIAAAFAANTDILWADFVQTIL HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCHHHHHHHHCCCCHHHHHHHHHHH RGALVGYVLGCGAAILTALAIDRSVFLQKGLLPVGNFIAALPIVGTAPILVMWYGFGPSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC KVAVVVAMVFFPMLVNAVQGLKTSNAIQRDLMHTYAASYGQTLVKLRLPTALPFLFNGLK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ICTTLALIGAIVAEFFGSPTVGMGFRIKIEVGRLAMDMVWAEITVAALAGSGLYGLMALL HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ERRLTFWHPSQRRLRA HHHHHHCCCCHHHCCC >Mature Secondary Structure SAVDPGTLPDRRLWFGLLCLAGGIAVFWLATAAEAAPGVALLVFWALMSGGAVLVATHV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH ARWVGAALPLALGATILGVWEMAVHIYDISPVILPAPSSIAAAFAANTDILWADFVQTIL HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCHHHHHHHHCCCCHHHHHHHHHHH RGALVGYVLGCGAAILTALAIDRSVFLQKGLLPVGNFIAALPIVGTAPILVMWYGFGPSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC KVAVVVAMVFFPMLVNAVQGLKTSNAIQRDLMHTYAASYGQTLVKLRLPTALPFLFNGLK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ICTTLALIGAIVAEFFGSPTVGMGFRIKIEVGRLAMDMVWAEITVAALAGSGLYGLMALL HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ERRLTFWHPSQRRLRA HHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]