| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055189
Identifier: 89055189
GI number: 89055189
Start: 2709102
End: 2709758
Strand: Reverse
Name: 89055189
Synonym: Jann_2698
Alternate gene names: NA
Gene position: 2709758-2709102 (Counterclockwise)
Preceding gene: 89055190
Following gene: 89055187
Centisome position: 62.76
GC content: 69.71
Gene sequence:
>657_bases ATGTCGATACTTGGAGTACTTGGGCCCGGACCCAATTCGCAGCCACCACCGGAGCCGCAGCAAAACCAGCAAACGCAGCC GGAGCCTGAAGTTCAGGAGACCTCGTCCTCAAGCGGGGCGGGTGACGCGAGTTCAAACACGTCGGGCAGTGGCACAAATC AGGGCCAGGACCAGAGCGGGTCCGGCGCTCAGAATGGGGCCTCTACCCCGCCTGCCACGCAGACGACGCAAACGGAAGCG CGACTGGCCGAACAGGCGCTGGCGGCGAGTGCGTCCGAGCCGGGCCCCGCCACGGCGTCCGCGCCCCCAGCCACAGGGGC TGACGCACAGCCCGCCGGCGCGACATCACTCGCGGGGGCCGCTGCAGAGACGCCGGCGGCGCTGTCTGAATCGGACGCGC GGGCACAGGCGGAAGCGGTCCGCGCCCAGGCGCAGGCAGCAGCCGTGATGGACGCAATTGGCCGAGCGGTTGAAGGACCG GATGTTACCGACCTCATCGCGGATCCCGGTGACGCGCAAGAGGCGGGCGCCCAGGACGCGGCCAAGGCCGAGGAGCAGGC GGGGGCAGCCCCGACAGTGGCCGAGGCGCGCTATACGGATATGGCGGGCCTTATGGCGCAGACGTCGGACGCATCCGGCG TGGATCAACGGGTGTAG
Upstream 100 bases:
>100_bases CAGGACGTTTTGCGTGACCCGGGGCGTGTGGTCATGTTTTATTCATATCTGCATCAGGTGGGGGTCTGAGGCGCGGACAT CACCGTGCAGGAGCAATTGA
Downstream 100 bases:
>100_bases GCACCCCAGACGATCAAAAACATGGAAGGCCCGCAGCATCCGCTCCGGGCCTTTTTTGATGTGGTATCGGTGCGGTGTTG ATGGTGAGCAAAGCGGTGTG
Product: flagellar protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSILGVLGPGPNSQPPPEPQQNQQTQPEPEVQETSSSSGAGDASSNTSGSGTNQGQDQSGSGAQNGASTPPATQTTQTEA RLAEQALAASASEPGPATASAPPATGADAQPAGATSLAGAAAETPAALSESDARAQAEAVRAQAQAAAVMDAIGRAVEGP DVTDLIADPGDAQEAGAQDAAKAEEQAGAAPTVAEARYTDMAGLMAQTSDASGVDQRV
Sequences:
>Translated_218_residues MSILGVLGPGPNSQPPPEPQQNQQTQPEPEVQETSSSSGAGDASSNTSGSGTNQGQDQSGSGAQNGASTPPATQTTQTEA RLAEQALAASASEPGPATASAPPATGADAQPAGATSLAGAAAETPAALSESDARAQAEAVRAQAQAAAVMDAIGRAVEGP DVTDLIADPGDAQEAGAQDAAKAEEQAGAAPTVAEARYTDMAGLMAQTSDASGVDQRV >Mature_217_residues SILGVLGPGPNSQPPPEPQQNQQTQPEPEVQETSSSSGAGDASSNTSGSGTNQGQDQSGSGAQNGASTPPATQTTQTEAR LAEQALAASASEPGPATASAPPATGADAQPAGATSLAGAAAETPAALSESDARAQAEAVRAQAQAAAVMDAIGRAVEGPD VTDLIADPGDAQEAGAQDAAKAEEQAGAAPTVAEARYTDMAGLMAQTSDASGVDQRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21131; Mature: 21000
Theoretical pI: Translated: 3.57; Mature: 3.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILGVLGPGPNSQPPPEPQQNQQTQPEPEVQETSSSSGAGDASSNTSGSGTNQGQDQSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SGAQNGASTPPATQTTQTEARLAEQALAASASEPGPATASAPPATGADAQPAGATSLAGA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC AAETPAALSESDARAQAEAVRAQAQAAAVMDAIGRAVEGPDVTDLIADPGDAQEAGAQDA HHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCHHH AKAEEQAGAAPTVAEARYTDMAGLMAQTSDASGVDQRV HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SILGVLGPGPNSQPPPEPQQNQQTQPEPEVQETSSSSGAGDASSNTSGSGTNQGQDQSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SGAQNGASTPPATQTTQTEARLAEQALAASASEPGPATASAPPATGADAQPAGATSLAGA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC AAETPAALSESDARAQAEAVRAQAQAAAVMDAIGRAVEGPDVTDLIADPGDAQEAGAQDA HHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCHHH AKAEEQAGAAPTVAEARYTDMAGLMAQTSDASGVDQRV HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA