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The map label for this gene is ygcA [C]

Identifier: 89055149

GI number: 89055149

Start: 2669528

End: 2669893

Strand: Direct

Name: ygcA [C]

Synonym: Jann_2658

Alternate gene names: 89055149

Gene position: 2669528-2669893 (Clockwise)

Preceding gene: 89055148

Following gene: 89055150

Centisome position: 61.82

GC content: 62.3

Gene sequence:

>366_bases
ATGACCTCTCAAGCCGCCTTCTGGGACAAAGCTGCGTCCAAATACGCCACATCCGCGATTTCCGACATGGAGGGGTATCG
CCATACGCTTGAGCGGACGCGGGCCCACCTGCGTCCAACCGACCGGGTGCTGGAACTGGGATGCGGTACAGCCTCCACAG
CGCTGGATCTGGCCGATGACGTGGCCCATGTCACGGCGAGTGATATCTCGCCCGCGATGGTGGAGATCGGGCAGCAGAAG
GTGGCGGAGGCCGGGGCCGAGAACATCACTGTGGTGACGTCGATCGCGGGCGACACAGACCTTGCCCAAGGCGCGCCCTA
TGATGTGGTCCTTGCGCTCAACCTGTTGCATTTGCTCCCAAACTAG

Upstream 100 bases:

>100_bases
GGCTCGCGCCGATCCGTGCCTGAGGGGGCGAGGTCGTGCCAGTTTCCCCGTAGTTCTGCCGGTGCGCGCGCCGTAGGCTG
GCCGTCAAAGGAGTACATCC

Downstream 100 bases:

>100_bases
GCCGAGGTGCTGTCCCGGATCCACAATATGCTGGAGCCCGGCGGGCTGTTTATCTCCAAAACGGCGTGTCTGGGGGAGCA
GTGGTTCTTCAGGCCACTCG

Product: type 12 methyltransferase

Products: NA

Alternate protein names: Methyltransferase; Methyltransferase UbiE/COQ5 Family; Methyltransferase Domain Family; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTSQAAFWDKAASKYATSAISDMEGYRHTLERTRAHLRPTDRVLELGCGTASTALDLADDVAHVTASDISPAMVEIGQQK
VAEAGAENITVVTSIAGDTDLAQGAPYDVVLALNLLHLLPN

Sequences:

>Translated_121_residues
MTSQAAFWDKAASKYATSAISDMEGYRHTLERTRAHLRPTDRVLELGCGTASTALDLADDVAHVTASDISPAMVEIGQQK
VAEAGAENITVVTSIAGDTDLAQGAPYDVVLALNLLHLLPN
>Mature_120_residues
TSQAAFWDKAASKYATSAISDMEGYRHTLERTRAHLRPTDRVLELGCGTASTALDLADDVAHVTASDISPAMVEIGQQKV
AEAGAENITVVTSIAGDTDLAQGAPYDVVLALNLLHLLPN

Specific function: Could Be A 23s rRNA (Uracil-5-)-Methyltransferase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12779; Mature: 12648

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQAAFWDKAASKYATSAISDMEGYRHTLERTRAHLRPTDRVLELGCGTASTALDLADD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHH
VAHVTASDISPAMVEIGQQKVAEAGAENITVVTSIAGDTDLAQGAPYDVVLALNLLHLLP
HHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
N
C
>Mature Secondary Structure 
TSQAAFWDKAASKYATSAISDMEGYRHTLERTRAHLRPTDRVLELGCGTASTALDLADD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHH
VAHVTASDISPAMVEIGQQKVAEAGAENITVVTSIAGDTDLAQGAPYDVVLALNLLHLLP
HHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA