| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055118
Identifier: 89055118
GI number: 89055118
Start: 2644339
End: 2645208
Strand: Reverse
Name: 89055118
Synonym: Jann_2627
Alternate gene names: NA
Gene position: 2645208-2644339 (Counterclockwise)
Preceding gene: 89055119
Following gene: 89055117
Centisome position: 61.26
GC content: 58.62
Gene sequence:
>870_bases ATGATCGATTTCCAAAAGCTTCAAAGAGACAACCTGGGAAAGGCGCACGTGAAGTTTCGCGAAGCCGGTTTGCAGGGCGG ACCCATTGCGCTCCTGTTGCACGGTCACAGTCAAACCCCCCTAATGTGGGCTGAAACGGCGGATCGTGCTGCGCAGGCGG GGTGGCATGTCTTTGCACCGTCCCTGCATGTCTACCGTGGCGAGGACAGACCCCTCAGCAAAGTCGAACTTGCTGAGGTA TTCGCAGCATTGGTCGCACAACGCGCGGGGCCGGATGCTCCATTGGTGGTTATCGGACACGACCTGGGGGCCATGGTCGC CTACGCCTTCGCGGCGACCCAAAAGGTCAGCGCCGCCGTCATTATGGAAGCGACGCCTCCCGGTGTCGGGTTCTGGCGTG ATCTTTTAACCGATCCGCGCACTTGGCATTTCGGGTTTTTTGGACACCACGCGGAACGTTTGGTCGAAAGACGGGAAGAC ATCTATCTCGAACGGTTCTGGCAAGAATTTTCCGCAGCAGGCTCGTCCCCAATGTCAGACATGCAGCGCAAGGACGCCAT CAATGACTTGCGCGTGCCCGGTGGTTTGCGCACCGCGCTTGGCCATTTTGCGGCCTTTGCGCAGGACGTCGAAGACAATG CAAACCTCGCAGACAAACCGATCGCCGCACCGATCCTGGCTGTCGGAGGCGAGGTCAGCTTTGGGCCCATGATCGGTGCG CAGATGGAACTCGTGGCACACGATGTGGAAACCCGCACCATCCCGGACGCCGGGCATTGGCTGCTGGAAGAAAATCCAGA CGCGACAATGACAATGCTTGCAGACTTTTTGGCCACCCACAAACCGGTCTCGTCACTGCTTTGCGAATGA
Upstream 100 bases:
>100_bases GCCGTCAGTTTGAAACAGCGATCAATGACACGCTGGCCGATCTCAAACTCTATGCTGAAACGGGCAAAATTCACCCTGAC AAGGCCAAGGCGCTGGCAGC
Downstream 100 bases:
>100_bases CCGTCCTCCGAAACCCCAACTCCTGACAACAGACAGAAAGAAGACATGACATGAGTATTGAACTTTGGTCCGTGATCGCA ACGGGCGTGATGATGTGGAT
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase; Epoxide Hydrolase; Soluble Epoxide Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Epoxide Hydrolase-Related Protein; Alpha/Beta Superfamily-Like Protein; Dehalogenase; Alpha/Beta Hydrolase Protein; Epoxide Hydrolase EphC
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MIDFQKLQRDNLGKAHVKFREAGLQGGPIALLLHGHSQTPLMWAETADRAAQAGWHVFAPSLHVYRGEDRPLSKVELAEV FAALVAQRAGPDAPLVVIGHDLGAMVAYAFAATQKVSAAVIMEATPPGVGFWRDLLTDPRTWHFGFFGHHAERLVERRED IYLERFWQEFSAAGSSPMSDMQRKDAINDLRVPGGLRTALGHFAAFAQDVEDNANLADKPIAAPILAVGGEVSFGPMIGA QMELVAHDVETRTIPDAGHWLLEENPDATMTMLADFLATHKPVSSLLCE
Sequences:
>Translated_289_residues MIDFQKLQRDNLGKAHVKFREAGLQGGPIALLLHGHSQTPLMWAETADRAAQAGWHVFAPSLHVYRGEDRPLSKVELAEV FAALVAQRAGPDAPLVVIGHDLGAMVAYAFAATQKVSAAVIMEATPPGVGFWRDLLTDPRTWHFGFFGHHAERLVERRED IYLERFWQEFSAAGSSPMSDMQRKDAINDLRVPGGLRTALGHFAAFAQDVEDNANLADKPIAAPILAVGGEVSFGPMIGA QMELVAHDVETRTIPDAGHWLLEENPDATMTMLADFLATHKPVSSLLCE >Mature_289_residues MIDFQKLQRDNLGKAHVKFREAGLQGGPIALLLHGHSQTPLMWAETADRAAQAGWHVFAPSLHVYRGEDRPLSKVELAEV FAALVAQRAGPDAPLVVIGHDLGAMVAYAFAATQKVSAAVIMEATPPGVGFWRDLLTDPRTWHFGFFGHHAERLVERRED IYLERFWQEFSAAGSSPMSDMQRKDAINDLRVPGGLRTALGHFAAFAQDVEDNANLADKPIAAPILAVGGEVSFGPMIGA QMELVAHDVETRTIPDAGHWLLEENPDATMTMLADFLATHKPVSSLLCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31561; Mature: 31561
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDFQKLQRDNLGKAHVKFREAGLQGGPIALLLHGHSQTPLMWAETADRAAQAGWHVFAP CCCHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHCCCEEECC SLHVYRGEDRPLSKVELAEVFAALVAQRAGPDAPLVVIGHDLGAMVAYAFAATQKVSAAV CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCEEE IMEATPPGVGFWRDLLTDPRTWHFGFFGHHAERLVERREDIYLERFWQEFSAAGSSPMSD EEECCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MQRKDAINDLRVPGGLRTALGHFAAFAQDVEDNANLADKPIAAPILAVGGEVSFGPMIGA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH QMELVAHDVETRTIPDAGHWLLEENPDATMTMLADFLATHKPVSSLLCE HHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure MIDFQKLQRDNLGKAHVKFREAGLQGGPIALLLHGHSQTPLMWAETADRAAQAGWHVFAP CCCHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHCCCEEECC SLHVYRGEDRPLSKVELAEVFAALVAQRAGPDAPLVVIGHDLGAMVAYAFAATQKVSAAV CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCEEE IMEATPPGVGFWRDLLTDPRTWHFGFFGHHAERLVERREDIYLERFWQEFSAAGSSPMSD EEECCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MQRKDAINDLRVPGGLRTALGHFAAFAQDVEDNANLADKPIAAPILAVGGEVSFGPMIGA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH QMELVAHDVETRTIPDAGHWLLEENPDATMTMLADFLATHKPVSSLLCE HHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA