The gene/protein map for NC_006155 is currently unavailable.
Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055071

Identifier: 89055071

GI number: 89055071

Start: 2590446

End: 2590733

Strand: Reverse

Name: 89055071

Synonym: Jann_2580

Alternate gene names: NA

Gene position: 2590733-2590446 (Counterclockwise)

Preceding gene: 89055073

Following gene: 89055070

Centisome position: 60.0

GC content: 61.46

Gene sequence:

>288_bases
TTGACAGACCCGGAGAGACCAATGCTGATCCTGAAACCAAATTGCGAATGCTGTGATGTGGACCTGCCGCCCGAGAGTCT
CGACGCGCGGAGTTGCACGTTTGAATGCACCTTCTGCGCCGATTGCACCGACACGCGCTTCGGGGGCATTTGCCCCAACT
GCGGCGGAGAGCTGCTGCGCCGTCCCATTCGCCCCGCCGCCCTTCTGGCCAAATACCCGGCTTCAACAGAGCGGTTCATC
AAAGCTCACCTCGCCTGCGCGGATCTGCAGATGGAGGCCGTGCCATGA

Upstream 100 bases:

>100_bases
AGCACGCAGTTGGGGTACACGACAAACAGAACCGGCTTGGCAGAAAAAGAGGTCATATTGTCCTTTATGCCAATCGCAGG
GAGCGTAAGCTAGGGCAAAT

Downstream 100 bases:

>100_bases
AAACGCTCGCCGCGCTGGTCTTTCCGGGCTTTGAAACGCTCGACTATTTTGGCCCGATGGAGATGTTGGGTGGCTCGGGA
GAGCAGATTGAGATCATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MTDPERPMLILKPNCECCDVDLPPESLDARSCTFECTFCADCTDTRFGGICPNCGGELLRRPIRPAALLAKYPASTERFI
KAHLACADLQMEAVP

Sequences:

>Translated_95_residues
MTDPERPMLILKPNCECCDVDLPPESLDARSCTFECTFCADCTDTRFGGICPNCGGELLRRPIRPAALLAKYPASTERFI
KAHLACADLQMEAVP
>Mature_94_residues
TDPERPMLILKPNCECCDVDLPPESLDARSCTFECTFCADCTDTRFGGICPNCGGELLRRPIRPAALLAKYPASTERFIK
AHLACADLQMEAVP

Specific function: Unknown

COG id: COG3813

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010696
- InterPro:   IPR013083 [H]

Pfam domain/function: PF06906 DUF1272 [H]

EC number: NA

Molecular weight: Translated: 10436; Mature: 10305

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
13.7 %Cys+Met (Translated Protein)
10.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
12.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPERPMLILKPNCECCDVDLPPESLDARSCTFECTFCADCTDTRFGGICPNCGGELLR
CCCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHH
RPIRPAALLAKYPASTERFIKAHLACADLQMEAVP
CCCCCHHHHHHCCCCHHHHHHHHHHHCCEEEECCC
>Mature Secondary Structure 
TDPERPMLILKPNCECCDVDLPPESLDARSCTFECTFCADCTDTRFGGICPNCGGELLR
CCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHH
RPIRPAALLAKYPASTERFIKAHLACADLQMEAVP
CCCCCHHHHHHCCCCHHHHHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8121412; 11481430 [H]