| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is kdgK [H]
Identifier: 89055065
GI number: 89055065
Start: 2583148
End: 2584047
Strand: Reverse
Name: kdgK [H]
Synonym: Jann_2574
Alternate gene names: 89055065
Gene position: 2584047-2583148 (Counterclockwise)
Preceding gene: 89055066
Following gene: 89055064
Centisome position: 59.84
GC content: 65.11
Gene sequence:
>900_bases ATGACGCGCGTGGTGTCGATTGGCGAGTGTATGGTCGAAATGGCACCCTCTGGCACGCCGGGGACCTTCGCGATGTCGTT TGCTGGCGATACGTTCAACATGGCCTGGTATCTGGCGCGGCTCGCACCCGGCTGGCAGGTTGAGTTCCTGACGGCCATCG GCACGGACAGTCTCTCGGACGCCTTCCGTACGTTTGCGGCAGATGCCGGGATCGGCACGCAGCATATGGCACGGCATCCG GACAGGGGATTGGGCCTCTACCTCACGCAGCTGGATGATGGGGAGCGCAGCTTCCACTATTGGCGCGAGACGTCCGCCGC CCGCACGCTGGCCAATGATGAAGAGGCGCTGACCGCGTCCTTGCAGGGCGCCGACATCGTGTTTTTCAGCGGCATAACAC TCGCCATCCTGACGGAGGAGGCGCGGGAAGTGCTGTTTGATGCCATCTCCGAGGCGCAGGCAGGTGGCGCAGTCGTGGCC TTCGATCCCAACATTCGCGACGCGCTTTGGGCCGATCCGGAAGATATGCGCGCGGCGATCATGGAAGCCGCTCTCAGCTC GGAAATCGTCATGCCGTCTTTTGAGGATGAAGCCCGCCACTTCGGCGATGCAAACCCTGCGGCGACCGTGGCGCGATACC TCTCGGCCGGGGCCACAAGCGTGGTCGTCAAGAACGGCGCGGGAGATGTCCACTATTCCTGCGGCGGGGAGGCGGGCGTC GCTACGCCCACATCCGTGAACGCGGTCGTCGATACCACGGCGGCGGGCGACAGCTTCAATGCGGCATTTCTGGCCAAGCT GATCGCGGGCACGCCGCCTGCCGACGCGGTGGCCGCCGCCTGTGCCGTCGCGGGCAACGTCATCCAGTCTCCCGGCGCGC TGGTGGAGGATATCGGCTGA
Upstream 100 bases:
>100_bases TTCCCGATGGATTTGCGCAAGTTGGTGGCTGACCAGGACCTTGAGCGGAGATCACAATGCCCCATCGCTTCACCATGTTC CCAGCCCCCAAGGTCGCCCA
Downstream 100 bases:
>100_bases GGTTCTGCGCCCATGGTCTCCTTTGTCCATTCCTCTGACCTGCACCTGGGCAAATCCTTCGGGACGTTTCCGGAAGATGT GCGCGTGCGTCTGCAACAGG
Product: 2-keto-3-deoxygluconate kinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTRVVSIGECMVEMAPSGTPGTFAMSFAGDTFNMAWYLARLAPGWQVEFLTAIGTDSLSDAFRTFAADAGIGTQHMARHP DRGLGLYLTQLDDGERSFHYWRETSAARTLANDEEALTASLQGADIVFFSGITLAILTEEAREVLFDAISEAQAGGAVVA FDPNIRDALWADPEDMRAAIMEAALSSEIVMPSFEDEARHFGDANPAATVARYLSAGATSVVVKNGAGDVHYSCGGEAGV ATPTSVNAVVDTTAAGDSFNAAFLAKLIAGTPPADAVAAACAVAGNVIQSPGALVEDIG
Sequences:
>Translated_299_residues MTRVVSIGECMVEMAPSGTPGTFAMSFAGDTFNMAWYLARLAPGWQVEFLTAIGTDSLSDAFRTFAADAGIGTQHMARHP DRGLGLYLTQLDDGERSFHYWRETSAARTLANDEEALTASLQGADIVFFSGITLAILTEEAREVLFDAISEAQAGGAVVA FDPNIRDALWADPEDMRAAIMEAALSSEIVMPSFEDEARHFGDANPAATVARYLSAGATSVVVKNGAGDVHYSCGGEAGV ATPTSVNAVVDTTAAGDSFNAAFLAKLIAGTPPADAVAAACAVAGNVIQSPGALVEDIG >Mature_298_residues TRVVSIGECMVEMAPSGTPGTFAMSFAGDTFNMAWYLARLAPGWQVEFLTAIGTDSLSDAFRTFAADAGIGTQHMARHPD RGLGLYLTQLDDGERSFHYWRETSAARTLANDEEALTASLQGADIVFFSGITLAILTEEAREVLFDAISEAQAGGAVVAF DPNIRDALWADPEDMRAAIMEAALSSEIVMPSFEDEARHFGDANPAATVARYLSAGATSVVVKNGAGDVHYSCGGEAGVA TPTSVNAVVDTTAAGDSFNAAFLAKLIAGTPPADAVAAACAVAGNVIQSPGALVEDIG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=301, Percent_Identity=35.2159468438538, Blast_Score=165, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 31051; Mature: 30920
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVVSIGECMVEMAPSGTPGTFAMSFAGDTFNMAWYLARLAPGWQVEFLTAIGTDSLSD CCCEEEHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHH AFRTFAADAGIGTQHMARHPDRGLGLYLTQLDDGERSFHYWRETSAARTLANDEEALTAS HHHHHHHCCCCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHEEE LQGADIVFFSGITLAILTEEAREVLFDAISEAQAGGAVVAFDPNIRDALWADPEDMRAAI CCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHH MEAALSSEIVMPSFEDEARHFGDANPAATVARYLSAGATSVVVKNGAGDVHYSCGGEAGV HHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCC ATPTSVNAVVDTTAAGDSFNAAFLAKLIAGTPPADAVAAACAVAGNVIQSPGALVEDIG CCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure TRVVSIGECMVEMAPSGTPGTFAMSFAGDTFNMAWYLARLAPGWQVEFLTAIGTDSLSD CCEEEHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHH AFRTFAADAGIGTQHMARHPDRGLGLYLTQLDDGERSFHYWRETSAARTLANDEEALTAS HHHHHHHCCCCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHEEE LQGADIVFFSGITLAILTEEAREVLFDAISEAQAGGAVVAFDPNIRDALWADPEDMRAAI CCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHH MEAALSSEIVMPSFEDEARHFGDANPAATVARYLSAGATSVVVKNGAGDVHYSCGGEAGV HHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCC ATPTSVNAVVDTTAAGDSFNAAFLAKLIAGTPPADAVAAACAVAGNVIQSPGALVEDIG CCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]