Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055056

Identifier: 89055056

GI number: 89055056

Start: 2570390

End: 2571091

Strand: Direct

Name: 89055056

Synonym: Jann_2565

Alternate gene names: NA

Gene position: 2570390-2571091 (Clockwise)

Preceding gene: 89055055

Following gene: 89055069

Centisome position: 59.53

GC content: 60.54

Gene sequence:

>702_bases
ATGGCTCCGGCGGTCCAATACGCAGAAGGGCTTTCAATCACCCTGACAAACACCGCCCCGTCCGAACCCTGGACGGCGGT
GTCTGTCGTTGTCACTCAGGCGGACCACAGGCATCGGATCACGTTTGTGGCCGAGCAACCTATGGAACTGGTTTTTTGTA
AAGAAATTGTTGACGTGCTGCGGCCCATCCTCGCCAATTTCGCGGGCGCGGAGGCTGACAGCGTCTATTCCAACCCCGAT
CTTGAAATCGCACTGCCCGGCCTGTCGATGCGGCAATTGCGGGTGATTTACTCCAGCCATGGGGAAGACCCCTCGCGCGT
GCTGATCCGGTTCGCGGCGTTCGTCGGCAACCCTCACCGGGCGCTTTTGCGCGATGACGGGTTTAGCCACCCGATGGATG
CGCTGACCTCCAAAGTCTACCGGGACGCGCTTGATTGGGTCCTGATGCCCGCGCTCAACATCGTGACGGTCGATGAAACC
AGCGGGTTCAACGCCGAAGACACCCATGATCTGGAAGATGCAATGGCGCATCTGCGCGAGTCGAAGGACCGGCTCTTGTT
TCAGGTCGAACTGGTCAAGCGAGAGCTTGGACGGCTGGAAGCGCACACCTATTCCCAGGCGCGCCCCCAGCCCGTTTTGC
TGGCCGCAGAGCCCGAGCAGGAAGAGTTTCGGACCCTCCGGGTGATCCGGGAGATGGACTGA

Upstream 100 bases:

>100_bases
GGCCGGTTCCAGCTAACAAACTCTTGATTCCTTTCATCGTTAAGAGTTTTTTAACGGGTATTGGCTACAATTTGACATGA
ATGCGAATACGGAGGATTCC

Downstream 100 bases:

>100_bases
CCCCACCGGCTATGGCGTGCCGTAGCCGCCTCCCCCCGGGGTGCGCAGGGTGAAGACGTCGCCCGGTGCAAGCTCAGCCT
GATCATTGCCGCCTAGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MAPAVQYAEGLSITLTNTAPSEPWTAVSVVVTQADHRHRITFVAEQPMELVFCKEIVDVLRPILANFAGAEADSVYSNPD
LEIALPGLSMRQLRVIYSSHGEDPSRVLIRFAAFVGNPHRALLRDDGFSHPMDALTSKVYRDALDWVLMPALNIVTVDET
SGFNAEDTHDLEDAMAHLRESKDRLLFQVELVKRELGRLEAHTYSQARPQPVLLAAEPEQEEFRTLRVIREMD

Sequences:

>Translated_233_residues
MAPAVQYAEGLSITLTNTAPSEPWTAVSVVVTQADHRHRITFVAEQPMELVFCKEIVDVLRPILANFAGAEADSVYSNPD
LEIALPGLSMRQLRVIYSSHGEDPSRVLIRFAAFVGNPHRALLRDDGFSHPMDALTSKVYRDALDWVLMPALNIVTVDET
SGFNAEDTHDLEDAMAHLRESKDRLLFQVELVKRELGRLEAHTYSQARPQPVLLAAEPEQEEFRTLRVIREMD
>Mature_232_residues
APAVQYAEGLSITLTNTAPSEPWTAVSVVVTQADHRHRITFVAEQPMELVFCKEIVDVLRPILANFAGAEADSVYSNPDL
EIALPGLSMRQLRVIYSSHGEDPSRVLIRFAAFVGNPHRALLRDDGFSHPMDALTSKVYRDALDWVLMPALNIVTVDETS
GFNAEDTHDLEDAMAHLRESKDRLLFQVELVKRELGRLEAHTYSQARPQPVLLAAEPEQEEFRTLRVIREMD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26175; Mature: 26044

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPAVQYAEGLSITLTNTAPSEPWTAVSVVVTQADHRHRITFVAEQPMELVFCKEIVDVL
CCCCHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHH
RPILANFAGAEADSVYSNPDLEIALPGLSMRQLRVIYSSHGEDPSRVLIRFAAFVGNPHR
HHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH
ALLRDDGFSHPMDALTSKVYRDALDWVLMPALNIVTVDETSGFNAEDTHDLEDAMAHLRE
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
SKDRLLFQVELVKRELGRLEAHTYSQARPQPVLLAAEPEQEEFRTLRVIREMD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
APAVQYAEGLSITLTNTAPSEPWTAVSVVVTQADHRHRITFVAEQPMELVFCKEIVDVL
CCCHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHH
RPILANFAGAEADSVYSNPDLEIALPGLSMRQLRVIYSSHGEDPSRVLIRFAAFVGNPHR
HHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH
ALLRDDGFSHPMDALTSKVYRDALDWVLMPALNIVTVDETSGFNAEDTHDLEDAMAHLRE
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
SKDRLLFQVELVKRELGRLEAHTYSQARPQPVLLAAEPEQEEFRTLRVIREMD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA