| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is lon [H]
Identifier: 89055009
GI number: 89055009
Start: 2516483
End: 2518882
Strand: Reverse
Name: lon [H]
Synonym: Jann_2518
Alternate gene names: 89055009
Gene position: 2518882-2516483 (Counterclockwise)
Preceding gene: 89055010
Following gene: 89055008
Centisome position: 58.33
GC content: 60.5
Gene sequence:
>2400_bases ATGTCCGAACAAACTATCTATCCCGTCCTGCCGCTGCGCGACATCGTGGTGTTCCCGCACATGGTGGTGCCGCTGTTCGT GGGCCGCGAAAAATCCGTGCGTGCGCTGGAAGAGGTGATGCAGGACGACAAGCAGATCCTGCTGTCGTCGCAACGGGACC CGGCGGAGGATGATCCCGGCACCGACGGCATCTTTGAAAACGGCGTGCTGGCCAATGTGCTGCAATTGCTGAAGCTGCCC GATGGCACCGTGAAGGTGCTTGTCGAAGGCCGTCGCCGCGTGCGGATCGAGGAATACACGTCCACTGAGCCGTTCTTTGA GGCGATTGCCGTCGAATTGTCCGAATCCACCGGCGATCTGGAAGCGATCACGGCGCTGACGCGGTCGGTGGCCGAAGAAT TCGAGAAATACGCCAAGGTGAAGAAGAACGTGCCGGAAGAGGCGCTGACCTCTGTATCGGAAGCGCATGATCCGGCGAAG CTGGCCGATCTTGTCTCCGGCCACCTGGGCATCGAGGTGGAGCAAAAGCAGGAGCTTCTTGAAACCCTCGAAGTCGCCGC GCGGCTAGAGAAGGTCTATGGCCTAATGCAGGGCGAAATGTCCGTGCTGCAGGTGGAAAAGAAGATCAAGACCCGCGTGA AGTCCCAGATGGAGCGGACCCAGCGCGAATATTACCTGAACGAACAGATGAAGGCGATCCAGCGGGAATTGGGCGATGGT GAAGAGGGCGAGGGCGAAGTGGCCGAGCTGTCGGAGCGGATCGCCAGCACCAAGCTGAGCAAGGAGGCGCGCGAAAAGGC CGATGCGGAGCTGAAGAAGCTCAAGAATATGTCGCCGATGAGCGCGGAAGCCACGGTTGTGCGCAACTACCTCGACTGGA TGCTGTCGATCCCGTGGGGCACGAAATCCCGCGTGAAAAAGGATCTGGGGCGTGCCCAGAAGATCCTCGACGACGATCAC TACAGCCTGGAGAAGGTGAAGGAGCGGATCGTTGAATATCTCGCGGTCCAGCAACGTTCCAAGAAGCTGAAGGGGCCGAT CATGTGCCTCGTCGGCCCTCCCGGCGTGGGTAAGACCTCATTGGGCAAATCGGTGGCCAAGGCGACGGGGCGGGAGTTCA TTCGGATTTCCCTCGGCGGCGTGCGCGATGAATCCGAGATCCGCGGCCATCGGCGCACCTATATCGGCTCCATGCCCGGC AAGATCATCCAGGCGCTCAGGAAAGCGAAGACGACGAACCCGCTTATTCTGTTGGACGAGATCGACAAGATGGGGCAGGA TTTCCGGGGCGATCCGGCATCCGCGATGCTGGAGGTGCTGGACCCCGAACAGAATGGCACCTTCGTGGATCACTATCTTG AGGTGGAATACGACCTTTCGAACGTGATGTTCCTTACCACCGCGAACTCCTACAACATGCCGGGCCCGCTTCTGGACCGG ATGGAGATCATTCCGCTGGCCGGCTACACCGAGGATGAAAAGGCCGAGATCGCCAATCGTCACCTCATCGCCAAGCAGGT GAAGAACCACGGGCTGAAGAAGAACGAATTCACGCTGGAGCCCGAAGCGCTGCAAGAGATGATCCGCACCTATACCCGTG AAGCGGGCGTGCGGAATCTGGAGCGGGAGATCGGGAAGCTCTGCCGCAAGGCGGTCACCAAGATCGTGCGCAAGGAGGTT GAAGAAGTCGTTGTAACCCCCGAGAATCTAGACGATTTCCTTGGCGTGAAGAAGTATCGCTACGGGTTGGCAGAGGATGC CGATGCCATCGGTGTTGTCACCGGCCTCGCCTATACGTCAGTGGGCGGCGACCTTCTGCATATCGAGGCGTTGAAGCTGC CCGGTAAGGGGCGGATGAAAACGACGGGCAAGCTCGGCGATGTGATGAAGGAAAGCATCGACGCGGCGGCCAGCTACGTC CGCTCCATCGCGCCAGAGATCGGGGTGAAGCCGCCTCGGTTTGACCGGATGGACATCCACGTCCACGTGCCCGATGGCGC GACACCCAAGGACGGGCCGTCTGCCGGTCTGGCCATGGTGACGTCCATCGTGTCGGTCCTCACGGGCATTCCCGTGAAGC GCGACATTGCGATGACGGGCGAGGTCAGCTTGCGCGGCAATGCGATGCCCATCGGCGGCTTGAAGGAAAAGCTGCTGGCT GCCCTGCGCGGTGGGATCACCACAGTTCTCATCCCGCAAGAGAATGAGAAGGACCTGGTGGAGATCCCGGACAACGTGAA GGACGGGCTGACCATCATCCCCGTGACCCATGTCTCGGAGGTTCTGGCCCATGCTCTGACAAGCAAACCCGAGCCAATCG AATGGGATGAGGCCGCTGAAGAGGCCGCCGCCGCTGCGGCTGCGATCGCTCAAGGCGGTCAGGGTGCGACGGCCCATTAG
Upstream 100 bases:
>100_bases CAAACACCCGCCCCACGTTAAGTTATCCTGAAGATGGAGAGGGCTAGGTTGCCGCCAAGCGGGGCCATGATCCTCTGCCT AAGACCAAGGAAGTAGGCAT
Downstream 100 bases:
>100_bases CACGTGTCGGACCGGGGCGGGACGTAAGCTCCGCCCCGCAAATGGCTGAAAAGAAATAAAAAAGGCCCGTAGCGTTTTTC AGCTACGGGCCTTTTTATTG
Product: Lon-A peptidase
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 799; Mature: 798
Protein sequence:
>799_residues MSEQTIYPVLPLRDIVVFPHMVVPLFVGREKSVRALEEVMQDDKQILLSSQRDPAEDDPGTDGIFENGVLANVLQLLKLP DGTVKVLVEGRRRVRIEEYTSTEPFFEAIAVELSESTGDLEAITALTRSVAEEFEKYAKVKKNVPEEALTSVSEAHDPAK LADLVSGHLGIEVEQKQELLETLEVAARLEKVYGLMQGEMSVLQVEKKIKTRVKSQMERTQREYYLNEQMKAIQRELGDG EEGEGEVAELSERIASTKLSKEAREKADAELKKLKNMSPMSAEATVVRNYLDWMLSIPWGTKSRVKKDLGRAQKILDDDH YSLEKVKERIVEYLAVQQRSKKLKGPIMCLVGPPGVGKTSLGKSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPG KIIQALRKAKTTNPLILLDEIDKMGQDFRGDPASAMLEVLDPEQNGTFVDHYLEVEYDLSNVMFLTTANSYNMPGPLLDR MEIIPLAGYTEDEKAEIANRHLIAKQVKNHGLKKNEFTLEPEALQEMIRTYTREAGVRNLEREIGKLCRKAVTKIVRKEV EEVVVTPENLDDFLGVKKYRYGLAEDADAIGVVTGLAYTSVGGDLLHIEALKLPGKGRMKTTGKLGDVMKESIDAAASYV RSIAPEIGVKPPRFDRMDIHVHVPDGATPKDGPSAGLAMVTSIVSVLTGIPVKRDIAMTGEVSLRGNAMPIGGLKEKLLA ALRGGITTVLIPQENEKDLVEIPDNVKDGLTIIPVTHVSEVLAHALTSKPEPIEWDEAAEEAAAAAAAIAQGGQGATAH
Sequences:
>Translated_799_residues MSEQTIYPVLPLRDIVVFPHMVVPLFVGREKSVRALEEVMQDDKQILLSSQRDPAEDDPGTDGIFENGVLANVLQLLKLP DGTVKVLVEGRRRVRIEEYTSTEPFFEAIAVELSESTGDLEAITALTRSVAEEFEKYAKVKKNVPEEALTSVSEAHDPAK LADLVSGHLGIEVEQKQELLETLEVAARLEKVYGLMQGEMSVLQVEKKIKTRVKSQMERTQREYYLNEQMKAIQRELGDG EEGEGEVAELSERIASTKLSKEAREKADAELKKLKNMSPMSAEATVVRNYLDWMLSIPWGTKSRVKKDLGRAQKILDDDH YSLEKVKERIVEYLAVQQRSKKLKGPIMCLVGPPGVGKTSLGKSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPG KIIQALRKAKTTNPLILLDEIDKMGQDFRGDPASAMLEVLDPEQNGTFVDHYLEVEYDLSNVMFLTTANSYNMPGPLLDR MEIIPLAGYTEDEKAEIANRHLIAKQVKNHGLKKNEFTLEPEALQEMIRTYTREAGVRNLEREIGKLCRKAVTKIVRKEV EEVVVTPENLDDFLGVKKYRYGLAEDADAIGVVTGLAYTSVGGDLLHIEALKLPGKGRMKTTGKLGDVMKESIDAAASYV RSIAPEIGVKPPRFDRMDIHVHVPDGATPKDGPSAGLAMVTSIVSVLTGIPVKRDIAMTGEVSLRGNAMPIGGLKEKLLA ALRGGITTVLIPQENEKDLVEIPDNVKDGLTIIPVTHVSEVLAHALTSKPEPIEWDEAAEEAAAAAAAIAQGGQGATAH >Mature_798_residues SEQTIYPVLPLRDIVVFPHMVVPLFVGREKSVRALEEVMQDDKQILLSSQRDPAEDDPGTDGIFENGVLANVLQLLKLPD GTVKVLVEGRRRVRIEEYTSTEPFFEAIAVELSESTGDLEAITALTRSVAEEFEKYAKVKKNVPEEALTSVSEAHDPAKL ADLVSGHLGIEVEQKQELLETLEVAARLEKVYGLMQGEMSVLQVEKKIKTRVKSQMERTQREYYLNEQMKAIQRELGDGE EGEGEVAELSERIASTKLSKEAREKADAELKKLKNMSPMSAEATVVRNYLDWMLSIPWGTKSRVKKDLGRAQKILDDDHY SLEKVKERIVEYLAVQQRSKKLKGPIMCLVGPPGVGKTSLGKSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPGK IIQALRKAKTTNPLILLDEIDKMGQDFRGDPASAMLEVLDPEQNGTFVDHYLEVEYDLSNVMFLTTANSYNMPGPLLDRM EIIPLAGYTEDEKAEIANRHLIAKQVKNHGLKKNEFTLEPEALQEMIRTYTREAGVRNLEREIGKLCRKAVTKIVRKEVE EVVVTPENLDDFLGVKKYRYGLAEDADAIGVVTGLAYTSVGGDLLHIEALKLPGKGRMKTTGKLGDVMKESIDAAASYVR SIAPEIGVKPPRFDRMDIHVHVPDGATPKDGPSAGLAMVTSIVSVLTGIPVKRDIAMTGEVSLRGNAMPIGGLKEKLLAA LRGGITTVLIPQENEKDLVEIPDNVKDGLTIIPVTHVSEVLAHALTSKPEPIEWDEAAEEAAAAAAAIAQGGQGATAH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=695, Percent_Identity=41.4388489208633, Blast_Score=539, Evalue=1e-153, Organism=Homo sapiens, GI31377667, Length=566, Percent_Identity=44.3462897526502, Blast_Score=499, Evalue=1e-141, Organism=Escherichia coli, GI1786643, Length=770, Percent_Identity=59.3506493506494, Blast_Score=927, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=654, Percent_Identity=41.8960244648318, Blast_Score=509, Evalue=1e-144, Organism=Caenorhabditis elegans, GI17556486, Length=543, Percent_Identity=39.5948434622468, Blast_Score=436, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6319449, Length=446, Percent_Identity=43.7219730941704, Blast_Score=389, Evalue=1e-108, Organism=Drosophila melanogaster, GI221513036, Length=649, Percent_Identity=41.9106317411402, Blast_Score=517, Evalue=1e-146, Organism=Drosophila melanogaster, GI24666867, Length=649, Percent_Identity=41.9106317411402, Blast_Score=517, Evalue=1e-146,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 87982; Mature: 87851
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQTIYPVLPLRDIVVFPHMVVPLFVGREKSVRALEEVMQDDKQILLSSQRDPAEDDPG CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TDGIFENGVLANVLQLLKLPDGTVKVLVEGRRRVRIEEYTSTEPFFEAIAVELSESTGDL CCCCCCCCHHHHHHHHHHCCCCCEEHEECCCHHEEEHHCCCCCHHHHHHHHHHHCCCCHH EAITALTRSVAEEFEKYAKVKKNVPEEALTSVSEAHDPAKLADLVSGHLGIEVEQKQELL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHHH ETLEVAARLEKVYGLMQGEMSVLQVEKKIKTRVKSQMERTQREYYLNEQMKAIQRELGDG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EEGEGEVAELSERIASTKLSKEAREKADAELKKLKNMSPMSAEATVVRNYLDWMLSIPWG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC TKSRVKKDLGRAQKILDDDHYSLEKVKERIVEYLAVQQRSKKLKGPIMCLVGPPGVGKTS CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH LGKSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALRKAKTTNPLILLDE HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHHH IDKMGQDFRGDPASAMLEVLDPEQNGTFVDHYLEVEYDLSNVMFLTTANSYNMPGPLLDR HHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHC MEIIPLAGYTEDEKAEIANRHLIAKQVKNHGLKKNEFTLEPEALQEMIRTYTREAGVRNL HHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHH EREIGKLCRKAVTKIVRKEVEEVVVTPENLDDFLGVKKYRYGLAEDADAIGVVTGLAYTS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VGGDLLHIEALKLPGKGRMKTTGKLGDVMKESIDAAASYVRSIAPEIGVKPPRFDRMDIH CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE VHVPDGATPKDGPSAGLAMVTSIVSVLTGIPVKRDIAMTGEVSLRGNAMPIGGLKEKLLA EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCCCCCCHHHHHHHH ALRGGITTVLIPQENEKDLVEIPDNVKDGLTIIPVTHVSEVLAHALTSKPEPIEWDEAAE HHHCCCEEEEECCCCCCCHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHH EAAAAAAAIAQGGQGATAH HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEQTIYPVLPLRDIVVFPHMVVPLFVGREKSVRALEEVMQDDKQILLSSQRDPAEDDPG CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TDGIFENGVLANVLQLLKLPDGTVKVLVEGRRRVRIEEYTSTEPFFEAIAVELSESTGDL CCCCCCCCHHHHHHHHHHCCCCCEEHEECCCHHEEEHHCCCCCHHHHHHHHHHHCCCCHH EAITALTRSVAEEFEKYAKVKKNVPEEALTSVSEAHDPAKLADLVSGHLGIEVEQKQELL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHHH ETLEVAARLEKVYGLMQGEMSVLQVEKKIKTRVKSQMERTQREYYLNEQMKAIQRELGDG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EEGEGEVAELSERIASTKLSKEAREKADAELKKLKNMSPMSAEATVVRNYLDWMLSIPWG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC TKSRVKKDLGRAQKILDDDHYSLEKVKERIVEYLAVQQRSKKLKGPIMCLVGPPGVGKTS CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH LGKSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALRKAKTTNPLILLDE HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHHH IDKMGQDFRGDPASAMLEVLDPEQNGTFVDHYLEVEYDLSNVMFLTTANSYNMPGPLLDR HHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHC MEIIPLAGYTEDEKAEIANRHLIAKQVKNHGLKKNEFTLEPEALQEMIRTYTREAGVRNL HHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHH EREIGKLCRKAVTKIVRKEVEEVVVTPENLDDFLGVKKYRYGLAEDADAIGVVTGLAYTS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VGGDLLHIEALKLPGKGRMKTTGKLGDVMKESIDAAASYVRSIAPEIGVKPPRFDRMDIH CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE VHVPDGATPKDGPSAGLAMVTSIVSVLTGIPVKRDIAMTGEVSLRGNAMPIGGLKEKLLA EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCCCCCCHHHHHHHH ALRGGITTVLIPQENEKDLVEIPDNVKDGLTIIPVTHVSEVLAHALTSKPEPIEWDEAAE HHHCCCEEEEECCCCCCCHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHH EAAAAAAAIAQGGQGATAH HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10762258; 11481430 [H]