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The map label for this gene is yjeA [H]

Identifier: 89055008

GI number: 89055008

Start: 2515058

End: 2515834

Strand: Reverse

Name: yjeA [H]

Synonym: Jann_2517

Alternate gene names: 89055008

Gene position: 2515834-2515058 (Counterclockwise)

Preceding gene: 89055009

Following gene: 89055007

Centisome position: 58.26

GC content: 63.96

Gene sequence:

>777_bases
ATGACTATTCTTCACCGTAGAGCGTTGCTGTTGGGAACGGTGTCTGCCCTTGCAACGCCCTTCGTGTCGGTGGCCGCACG
GGCGCAGAGCCTGCCGCAGACGTTTGCCGGACGCGGGCCGATCACCCGGGGCGAAGCCGCAACCGTCACGCGCATCCCGA
CCGCGCAGCCCTTGGTTGCGATGACGTTTGACGATGGCCCACACCCCAATCTGACGCCGCAATTGCTGGATATGTTGCGG
GTCAGGGGCATCCGCGCCACGTTCTATGTGATTGGCCGCAATGCGGCGCGCTATCCGCAGATCCTGCAACGGATGGTGGC
TGAGGGCCATGAGATCGGCAACCATACATGGTCCCATCCCAGTCTCCATGGTCACTCCGATGCCTCGGTCCTCAGTCAGG
TCGACCGGACGAACCGCGCGGTCTTTGATGCCGTGGGGCGTCCACCCGTTACCATGCGTCCGCCCTATGGCAATCTTTAT
GATCGCCAACGGCTGATGCTGTTTGAAACCCGTGCCATGCCAACGATTCTCTGGTCGGTGGATACGCTGGACTGGCAGCG
CCCGGGGTCGTCCATCATCGCGCAGCGGGTTGTTGGTGGCAGTCACACCGGCGCCGTGATCCTGGCCCACGACATCCACA
GCGCCACGGTGCGCGCCATGCCCACGGCCCTAGACGGGGTCACGGGGCGCGGGTTTCGGTTCGTCACAATGTCTGAGCTG
ATCGGATGGCCCCGCTGGGATCGCCGCCGGCTGCGTCTGGTGGAGGCTGCGTCTTAA

Upstream 100 bases:

>100_bases
CCCCTATCGCCCGCCGCAAGTTGCTGATTCGTTGCGCAGTTGCCGCCGCACCGCCCATGGTTGAGCGGCACTTTTTCGAG
GCCGAGGGACGGCAGCCGCT

Downstream 100 bases:

>100_bases
CGCTGATTTCTGGGGCAGGGTGGTCCAATCACTCCGGTTCGGCTAGGTTGTTCCCAGATCAGAAACAATCAGTGTGCCGG
GCCTTTGAGGTCAAGGCGCT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTILHRRALLLGTVSALATPFVSVAARAQSLPQTFAGRGPITRGEAATVTRIPTAQPLVAMTFDDGPHPNLTPQLLDMLR
VRGIRATFYVIGRNAARYPQILQRMVAEGHEIGNHTWSHPSLHGHSDASVLSQVDRTNRAVFDAVGRPPVTMRPPYGNLY
DRQRLMLFETRAMPTILWSVDTLDWQRPGSSIIAQRVVGGSHTGAVILAHDIHSATVRAMPTALDGVTGRGFRFVTMSEL
IGWPRWDRRRLRLVEAAS

Sequences:

>Translated_258_residues
MTILHRRALLLGTVSALATPFVSVAARAQSLPQTFAGRGPITRGEAATVTRIPTAQPLVAMTFDDGPHPNLTPQLLDMLR
VRGIRATFYVIGRNAARYPQILQRMVAEGHEIGNHTWSHPSLHGHSDASVLSQVDRTNRAVFDAVGRPPVTMRPPYGNLY
DRQRLMLFETRAMPTILWSVDTLDWQRPGSSIIAQRVVGGSHTGAVILAHDIHSATVRAMPTALDGVTGRGFRFVTMSEL
IGWPRWDRRRLRLVEAAS
>Mature_257_residues
TILHRRALLLGTVSALATPFVSVAARAQSLPQTFAGRGPITRGEAATVTRIPTAQPLVAMTFDDGPHPNLTPQLLDMLRV
RGIRATFYVIGRNAARYPQILQRMVAEGHEIGNHTWSHPSLHGHSDASVLSQVDRTNRAVFDAVGRPPVTMRPPYGNLYD
RQRLMLFETRAMPTILWSVDTLDWQRPGSSIIAQRVVGGSHTGAVILAHDIHSATVRAMPTALDGVTGRGFRFVTMSELI
GWPRWDRRRLRLVEAAS

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=192, Percent_Identity=32.8125, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6323339, Length=168, Percent_Identity=36.3095238095238, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 28476; Mature: 28345

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILHRRALLLGTVSALATPFVSVAARAQSLPQTFAGRGPITRGEAATVTRIPTAQPLVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEE
MTFDDGPHPNLTPQLLDMLRVRGIRATFYVIGRNAARYPQILQRMVAEGHEIGNHTWSHP
EEECCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCHHCCCCCCCCC
SLHGHSDASVLSQVDRTNRAVFDAVGRPPVTMRPPYGNLYDRQRLMLFETRAMPTILWSV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEEE
DTLDWQRPGSSIIAQRVVGGSHTGAVILAHDIHSATVRAMPTALDGVTGRGFRFVTMSEL
CCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCHHHCCCCCCCEEEEEHHHH
IGWPRWDRRRLRLVEAAS
HCCCCCCHHHHHHEECCC
>Mature Secondary Structure 
TILHRRALLLGTVSALATPFVSVAARAQSLPQTFAGRGPITRGEAATVTRIPTAQPLVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEE
MTFDDGPHPNLTPQLLDMLRVRGIRATFYVIGRNAARYPQILQRMVAEGHEIGNHTWSHP
EEECCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCHHCCCCCCCCC
SLHGHSDASVLSQVDRTNRAVFDAVGRPPVTMRPPYGNLYDRQRLMLFETRAMPTILWSV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEEE
DTLDWQRPGSSIIAQRVVGGSHTGAVILAHDIHSATVRAMPTALDGVTGRGFRFVTMSEL
CCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCHHHCCCCCCCEEEEEHHHH
IGWPRWDRRRLRLVEAAS
HCCCCCCHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]