| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054984
Identifier: 89054984
GI number: 89054984
Start: 2492090
End: 2492563
Strand: Direct
Name: 89054984
Synonym: Jann_2493
Alternate gene names: NA
Gene position: 2492090-2492563 (Clockwise)
Preceding gene: 89054983
Following gene: 89054985
Centisome position: 57.71
GC content: 64.98
Gene sequence:
>474_bases ATGGCCTCCCGGCGCAACCTGATCATTCTGGCGGGCCTGGGCTCGCTCGGGCTGTTTCTGGGTGCGCTCTACTTTCAGTA TTGGGTGGGTCTGCTGCCTTGCACCATGTGTCTGTGGCAGCGCTGGCCGCACCGGATCGCGATTGGTCTGGCGGTGGTGG GCGTGGTGTTTCCCCGCGCCGTGATCGCGTTGCTTGGCGGCTTGTCGATGGTGGTCAATGCCGGTATCGCGCTGCTGCAC ACCGGCGTGGAGCAGCGCTGGTGGGACGGCCCCCAGGTCTGTGGCGCATCGGCGGCCCAGGATGTGGGCAGCCTGTCGGT CGAAGATCTGTTCGATACGACGTCAGGCCCGCAAATCGTGCTGTGCAATGAGGCGGCCTGGCACTTCGCGGGCCTCAGCA TGGCAAGCTGGAATGGGATCATATGTCTGATCCTTGCGGGCCTCTGGTTGGCCGCTGCGCGGGCGAAAGCCTGA
Upstream 100 bases:
>100_bases GGGAACCGATCAAGGCGTTTATCGAGCGGCAATTGCCGCTGATGTTCATCCTGTTCTGCGCGCTGCTGGTCGGCGGCTTC TACGTGCTGAAGTTCCTGTG
Downstream 100 bases:
>100_bases TCGGCCCCTCCTCGGTCTTTCCAAGGCCTCCTCGCAGCGGTTTTGAACTGGCCCCGCGGGCGCTATCACGCCATTGCACC CCATATCGCGGACGGCTATA
Product: disulfide bond formation protein DsbB
Products: NA
Alternate protein names: Disulfide Bond Formation Protein DsbB Family; Disulfide Bond Formation Protein DsbB; Disulfide Bond Formation Protein B; Disulfide Bond Formation Protein; Disulphide Bond Formation Protein; DsbB Family Disulfide Bond Formation Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MASRRNLIILAGLGSLGLFLGALYFQYWVGLLPCTMCLWQRWPHRIAIGLAVVGVVFPRAVIALLGGLSMVVNAGIALLH TGVEQRWWDGPQVCGASAAQDVGSLSVEDLFDTTSGPQIVLCNEAAWHFAGLSMASWNGIICLILAGLWLAAARAKA
Sequences:
>Translated_157_residues MASRRNLIILAGLGSLGLFLGALYFQYWVGLLPCTMCLWQRWPHRIAIGLAVVGVVFPRAVIALLGGLSMVVNAGIALLH TGVEQRWWDGPQVCGASAAQDVGSLSVEDLFDTTSGPQIVLCNEAAWHFAGLSMASWNGIICLILAGLWLAAARAKA >Mature_156_residues ASRRNLIILAGLGSLGLFLGALYFQYWVGLLPCTMCLWQRWPHRIAIGLAVVGVVFPRAVIALLGGLSMVVNAGIALLHT GVEQRWWDGPQVCGASAAQDVGSLSVEDLFDTTSGPQIVLCNEAAWHFAGLSMASWNGIICLILAGLWLAAARAKA
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16717; Mature: 16586
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRRNLIILAGLGSLGLFLGALYFQYWVGLLPCTMCLWQRWPHRIAIGLAVVGVVFPRA CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VIALLGGLSMVVNAGIALLHTGVEQRWWDGPQVCGASAAQDVGSLSVEDLFDTTSGPQIV HHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHCCCHHHHHHHCCCHHHHHCCCCCCEEE LCNEAAWHFAGLSMASWNGIICLILAGLWLAAARAKA EECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASRRNLIILAGLGSLGLFLGALYFQYWVGLLPCTMCLWQRWPHRIAIGLAVVGVVFPRA CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VIALLGGLSMVVNAGIALLHTGVEQRWWDGPQVCGASAAQDVGSLSVEDLFDTTSGPQIV HHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHCCCHHHHHHHCCCHHHHHCCCCCCEEE LCNEAAWHFAGLSMASWNGIICLILAGLWLAAARAKA EECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA