| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054879
Identifier: 89054879
GI number: 89054879
Start: 2390603
End: 2391223
Strand: Reverse
Name: 89054879
Synonym: Jann_2388
Alternate gene names: NA
Gene position: 2391223-2390603 (Counterclockwise)
Preceding gene: 89054884
Following gene: 89054877
Centisome position: 55.38
GC content: 64.09
Gene sequence:
>621_bases ATGGAAAGCAATCCGATGACTCAATCGCCCGCCCCTCACGCCGCGCAAGACGCAGGGTCTGATGGGGCCTCCGTGTCCAC GTTGCTGCCGGGGTCGATGCGGGCTGTCATTTCTCATCCCCTGGGCGGAAAGATCATCATGACGGGGTTTCCCGGTCTGG ACACGGGCTTTGACGGGCAGACGGTGTTTCTGCCGGATATCTGCCGTGACACCCTGACCGGCCTGCGCGCGCATGGGACT GATACGCTTGTGATTCTTGTGGAACGCGATGAGCTGGACGCGCCGGGGTTTGACCTGCTGGAGCGCACGGCGGTGGAGCT GGGGCTTGAGACGATCTATCACCCCATCGTCGATTATTCCGTTCCCTCGACCGCTATGGCAGAGGCATGGACCGCGCAGC GCCCGGAGCGGGTGGCCAAGTTGCGTGCGGGCGGCACCCTGGCCTTCAGCTGCCAATACGGCGCAGGCCGCAGCGGCTTG ATGGCCAGCTGGACATTGATGGAGGGCGGCTTGTCGGCATCCGAGGCAATCGCCCTGGTGCGCAGTCATTTCCCCGAGGC CGTGGAGAGCGACGCGCAAGAGGCGTGGCTGGCCAATCTTCGGCTCAGCAGCAACGATTAG
Upstream 100 bases:
>100_bases TCGGCGATTGAGTCGGCGTTGTGTTTCGGCATCTGACAGGGCTTTCGGGGGCGTTCTCGTTGCGGTGACCGTCCAATAAG TATATCTGTATACATCTCTT
Downstream 100 bases:
>100_bases GGCCACAAATCGCCTAAAATTGACGCGCGCGAAATTTTGGTTGCCAAGGTGCTGTGAACGTGTATACCTGTGTATGACAG GACGCGAAGCGGTTGAAGCG
Product: dual specificity protein phosphatase
Products: NA
Alternate protein names: ADP-Ribosyl-(Dinitrogen Reductase) Hydrolase; Phosphatase Family Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MESNPMTQSPAPHAAQDAGSDGASVSTLLPGSMRAVISHPLGGKIIMTGFPGLDTGFDGQTVFLPDICRDTLTGLRAHGT DTLVILVERDELDAPGFDLLERTAVELGLETIYHPIVDYSVPSTAMAEAWTAQRPERVAKLRAGGTLAFSCQYGAGRSGL MASWTLMEGGLSASEAIALVRSHFPEAVESDAQEAWLANLRLSSND
Sequences:
>Translated_206_residues MESNPMTQSPAPHAAQDAGSDGASVSTLLPGSMRAVISHPLGGKIIMTGFPGLDTGFDGQTVFLPDICRDTLTGLRAHGT DTLVILVERDELDAPGFDLLERTAVELGLETIYHPIVDYSVPSTAMAEAWTAQRPERVAKLRAGGTLAFSCQYGAGRSGL MASWTLMEGGLSASEAIALVRSHFPEAVESDAQEAWLANLRLSSND >Mature_206_residues MESNPMTQSPAPHAAQDAGSDGASVSTLLPGSMRAVISHPLGGKIIMTGFPGLDTGFDGQTVFLPDICRDTLTGLRAHGT DTLVILVERDELDAPGFDLLERTAVELGLETIYHPIVDYSVPSTAMAEAWTAQRPERVAKLRAGGTLAFSCQYGAGRSGL MASWTLMEGGLSASEAIALVRSHFPEAVESDAQEAWLANLRLSSND
Specific function: Unknown
COG id: COG2453
COG function: function code T; Predicted protein-tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21786; Mature: 21786
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESNPMTQSPAPHAAQDAGSDGASVSTLLPGSMRAVISHPLGGKIIMTGFPGLDTGFDGQ CCCCCCCCCCCCCCHHCCCCCCCEEEEECCCHHHHHHCCCCCCEEEEECCCCCCCCCCCC TVFLPDICRDTLTGLRAHGTDTLVILVERDELDAPGFDLLERTAVELGLETIYHPIVDYS EEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC VPSTAMAEAWTAQRPERVAKLRAGGTLAFSCQYGAGRSGLMASWTLMEGGLSASEAIALV CCCHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEHHHCCCCHHHHHHHH RSHFPEAVESDAQEAWLANLRLSSND HHHCHHHHHHHHHHHHHHHEEECCCC >Mature Secondary Structure MESNPMTQSPAPHAAQDAGSDGASVSTLLPGSMRAVISHPLGGKIIMTGFPGLDTGFDGQ CCCCCCCCCCCCCCHHCCCCCCCEEEEECCCHHHHHHCCCCCCEEEEECCCCCCCCCCCC TVFLPDICRDTLTGLRAHGTDTLVILVERDELDAPGFDLLERTAVELGLETIYHPIVDYS EEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC VPSTAMAEAWTAQRPERVAKLRAGGTLAFSCQYGAGRSGLMASWTLMEGGLSASEAIALV CCCHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEHHHCCCCHHHHHHHH RSHFPEAVESDAQEAWLANLRLSSND HHHCHHHHHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA