| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054840
Identifier: 89054840
GI number: 89054840
Start: 2355723
End: 2356628
Strand: Direct
Name: 89054840
Synonym: Jann_2349
Alternate gene names: NA
Gene position: 2355723-2356628 (Clockwise)
Preceding gene: 89054839
Following gene: 89054842
Centisome position: 54.56
GC content: 62.69
Gene sequence:
>906_bases TTGCTTTCGCGGGTCAACGCGTGGCAAGCACCGGGCATGAATCTGCTCTACGACAGCCCCGCCGCCTTTCGCGATGCCCC CGCCAAGCGGATCTCCGTCTTTGGCATGTCCGGGCTTGGAAAGACCGTGCTCTCCAACAAGCTGCGCGATGGCGGGGATT GGTTTCACTACTCCGTCGATTACCGCATCGGCACGGCCTATATGGGCGAGCACATTACCGATAACCTGAAGGCCCAGGCC ATGCAGGTGCCGTTTCTGGCGGATCTGTTTCGGTCCGACAGTATCTACATCGGCTCCAACATCACCTTCGGCAATCTCGC GCCCTTGTCGACCTATCTGGGCAAGCCCGGTGATCCGTCGAAAGGTGGCCTGCCGTTTGCGGAATACACGCGGCGACAGG CGTTGCATCGGCGGGCGGAGGTCAATGCGCTGCTGGATACGGTGCCCTTCATCCACCGCGCGACCTCGCTTTACGGCTAC GGGAATTTCATCTGCGACACCGGCGGGTCGATCTGTGAGGTGGTGGATCCTGCCGATGCCGACGATGAGGTGTTGCGCAC GCTGGCCCAGAATACGCTGATGATCTGGATCGAGAGCCCGGAGGGCCACGACGCCGAATTGATCCGCCGCTTCAAGCTGA ACCCCAAGCCGATCTACTACCGGCCCGAGATGCTGGAGACCCTCTGGCAGGGGTATCTGGACGACCATGGCGTGTCTGAG GAGGCCGTCGACCCTGACGCATTCGCCGTCCACGCGTTCGCAAATGTCATCCACAACCGCGCGCCGCTTTATGCGGCCAT GGCACAGGGGTGGGGCGTGAGTGTGACGGCATCCGAGGTTGAAGCCGTGCGCGATGCGGCGGACGCGGTAGATCTGGTTG CGGACGCGCTGGCGCGGACGGCCTAG
Upstream 100 bases:
>100_bases CCTGCGCCACCAACAGCGCTTCATCAGCTCCACCGGGCGGGCCTATAATCAGGGCGTCTGGTATCGCAACTGATCGACGC CGGCCGGTGTCCACGGACGC
Downstream 100 bases:
>100_bases CGGCAGGCCTCCGTCACTGTGGCGATCGCCCGGGACGATCCGGACAGGGAGAAATTGCCCAGAACGTTGCCATCCGTGGA CAGCAGCTGCGCGCCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MLSRVNAWQAPGMNLLYDSPAAFRDAPAKRISVFGMSGLGKTVLSNKLRDGGDWFHYSVDYRIGTAYMGEHITDNLKAQA MQVPFLADLFRSDSIYIGSNITFGNLAPLSTYLGKPGDPSKGGLPFAEYTRRQALHRRAEVNALLDTVPFIHRATSLYGY GNFICDTGGSICEVVDPADADDEVLRTLAQNTLMIWIESPEGHDAELIRRFKLNPKPIYYRPEMLETLWQGYLDDHGVSE EAVDPDAFAVHAFANVIHNRAPLYAAMAQGWGVSVTASEVEAVRDAADAVDLVADALARTA
Sequences:
>Translated_301_residues MLSRVNAWQAPGMNLLYDSPAAFRDAPAKRISVFGMSGLGKTVLSNKLRDGGDWFHYSVDYRIGTAYMGEHITDNLKAQA MQVPFLADLFRSDSIYIGSNITFGNLAPLSTYLGKPGDPSKGGLPFAEYTRRQALHRRAEVNALLDTVPFIHRATSLYGY GNFICDTGGSICEVVDPADADDEVLRTLAQNTLMIWIESPEGHDAELIRRFKLNPKPIYYRPEMLETLWQGYLDDHGVSE EAVDPDAFAVHAFANVIHNRAPLYAAMAQGWGVSVTASEVEAVRDAADAVDLVADALARTA >Mature_301_residues MLSRVNAWQAPGMNLLYDSPAAFRDAPAKRISVFGMSGLGKTVLSNKLRDGGDWFHYSVDYRIGTAYMGEHITDNLKAQA MQVPFLADLFRSDSIYIGSNITFGNLAPLSTYLGKPGDPSKGGLPFAEYTRRQALHRRAEVNALLDTVPFIHRATSLYGY GNFICDTGGSICEVVDPADADDEVLRTLAQNTLMIWIESPEGHDAELIRRFKLNPKPIYYRPEMLETLWQGYLDDHGVSE EAVDPDAFAVHAFANVIHNRAPLYAAMAQGWGVSVTASEVEAVRDAADAVDLVADALARTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33061; Mature: 33061
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRVNAWQAPGMNLLYDSPAAFRDAPAKRISVFGMSGLGKTVLSNKLRDGGDWFHYSVD CCCCCCCCCCCCCCEEECCCHHHHCCCHHHEEEECCCCCCHHHHHHHCCCCCCEEEEEEE YRIGTAYMGEHITDNLKAQAMQVPFLADLFRSDSIYIGSNITFGNLAPLSTYLGKPGDPS EEECHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEECCCCCCCCCCHHHHHCCCCCCCC KGGLPFAEYTRRQALHRRAEVNALLDTVPFIHRATSLYGYGNFICDTGGSICEVVDPADA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCC DDEVLRTLAQNTLMIWIESPEGHDAELIRRFKLNPKPIYYRPEMLETLWQGYLDDHGVSE HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCCC EAVDPDAFAVHAFANVIHNRAPLYAAMAQGWGVSVTASEVEAVRDAADAVDLVADALART CCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC A C >Mature Secondary Structure MLSRVNAWQAPGMNLLYDSPAAFRDAPAKRISVFGMSGLGKTVLSNKLRDGGDWFHYSVD CCCCCCCCCCCCCCEEECCCHHHHCCCHHHEEEECCCCCCHHHHHHHCCCCCCEEEEEEE YRIGTAYMGEHITDNLKAQAMQVPFLADLFRSDSIYIGSNITFGNLAPLSTYLGKPGDPS EEECHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEECCCCCCCCCCHHHHHCCCCCCCC KGGLPFAEYTRRQALHRRAEVNALLDTVPFIHRATSLYGYGNFICDTGGSICEVVDPADA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCC DDEVLRTLAQNTLMIWIESPEGHDAELIRRFKLNPKPIYYRPEMLETLWQGYLDDHGVSE HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCCC EAVDPDAFAVHAFANVIHNRAPLYAAMAQGWGVSVTASEVEAVRDAADAVDLVADALART CCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA