| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is sam [H]
Identifier: 89054836
GI number: 89054836
Start: 2351948
End: 2352859
Strand: Direct
Name: sam [H]
Synonym: Jann_2345
Alternate gene names: 89054836
Gene position: 2351948-2352859 (Clockwise)
Preceding gene: 89054835
Following gene: 89054837
Centisome position: 54.47
GC content: 62.72
Gene sequence:
>912_bases ATGACCGACACTCCGACCACCGTGCCGGACCTGCCCGCGTCCAACGTCCCCAAGGCAGCGGCTTATATGATCGGCGCGAT CTTTGCGTTCTCCGCCATGGCGGTGGCCGGGCGCGAAGCGACTGTGGACCTCGATACCTTTGAGTTGATGACCTACCGTT CCGTCGTAGGCCTTGTGCTGGTGCTTTTGGTGGGGGGGCTTACCGGCCACCTCCCGGAGATCCGCACCAACCGGATGCCC ACCCACATCCTGCGCAACATCTTCCACTTCACCGGCCAGAACCTGTGGTTTTTCGCCGTGGGCGTGATCCCGCTGGCGCA ACTTTTCGCGTTGGAGTTCACGTCTCCTCTGTGGGTGATGGGCCTGGCCGCGCTGTTTCTGGGGGAGCGTCTGACACGCG TGAAGGTGGCAGCCGCGATCATCGGGTTCGTCGGCGTGCTGATCGTGGTGCAGCCGGGCTCTGCCCCGTTTTCCACCGGG ATGGGGGCGGCGTTGTTGGCGGCGATCTGCTTTGCGGCGACGGCGATTTTCACCAAACGCCTCACCAACGATCAATCCAC GACGTGCATCCTCTTTTGGCTGACGGTCATCCAACTGATCCTGGGCCTGATCTTTTGCCTCTACGATGGAGAGATGGCTT GGCCCGACGCGGCCACACGGCCCTGGGTCATCCTGATCGGGTTCGCGGGCCTGATCGCGCATTTCTGCATGACGTCGGCC TTTGCCCATGCGCCCGCCTCGGTCGTGATGCCGATTGATTTCGCACGCCTGCCCCTGATCGCGGTCGTGGGGATGCTGTT TTATGGGGAGCCGTTGCTGCTTGGCGTCTTGATCGGTGCGTTTCTGATTTTCGGGGCCAACTACATGAACATCCTGGCCG AGCATCGCCGCAGCCAGCGCGGCACCCCCTGA
Upstream 100 bases:
>100_bases GAGGAAATGGACGCGCTGTGGGATGCCGCGAAGGCCAAGGGCCTGTGACATTCCCTGCCCGCCGGACCCCGCCTGTTCAC CGGTTCAAGTGGCGGCCAAC
Downstream 100 bases:
>100_bases AAGTGTAACTAATGGGCCACAGGGCCTTCGGCTAAAGTGACCTGCCCAACAGGTGACGCGGCGGAATATTTGACCAAAGC GCCGTTCTTTTGGCCTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTDTPTTVPDLPASNVPKAAAYMIGAIFAFSAMAVAGREATVDLDTFELMTYRSVVGLVLVLLVGGLTGHLPEIRTNRMP THILRNIFHFTGQNLWFFAVGVIPLAQLFALEFTSPLWVMGLAALFLGERLTRVKVAAAIIGFVGVLIVVQPGSAPFSTG MGAALLAAICFAATAIFTKRLTNDQSTTCILFWLTVIQLILGLIFCLYDGEMAWPDAATRPWVILIGFAGLIAHFCMTSA FAHAPASVVMPIDFARLPLIAVVGMLFYGEPLLLGVLIGAFLIFGANYMNILAEHRRSQRGTP
Sequences:
>Translated_303_residues MTDTPTTVPDLPASNVPKAAAYMIGAIFAFSAMAVAGREATVDLDTFELMTYRSVVGLVLVLLVGGLTGHLPEIRTNRMP THILRNIFHFTGQNLWFFAVGVIPLAQLFALEFTSPLWVMGLAALFLGERLTRVKVAAAIIGFVGVLIVVQPGSAPFSTG MGAALLAAICFAATAIFTKRLTNDQSTTCILFWLTVIQLILGLIFCLYDGEMAWPDAATRPWVILIGFAGLIAHFCMTSA FAHAPASVVMPIDFARLPLIAVVGMLFYGEPLLLGVLIGAFLIFGANYMNILAEHRRSQRGTP >Mature_302_residues TDTPTTVPDLPASNVPKAAAYMIGAIFAFSAMAVAGREATVDLDTFELMTYRSVVGLVLVLLVGGLTGHLPEIRTNRMPT HILRNIFHFTGQNLWFFAVGVIPLAQLFALEFTSPLWVMGLAALFLGERLTRVKVAAAIIGFVGVLIVVQPGSAPFSTGM GAALLAAICFAATAIFTKRLTNDQSTTCILFWLTVIQLILGLIFCLYDGEMAWPDAATRPWVILIGFAGLIAHFCMTSAF AHAPASVVMPIDFARLPLIAVVGMLFYGEPLLLGVLIGAFLIFGANYMNILAEHRRSQRGTP
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32620; Mature: 32489
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTPTTVPDLPASNVPKAAAYMIGAIFAFSAMAVAGREATVDLDTFELMTYRSVVGLVL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHH VLLVGGLTGHLPEIRTNRMPTHILRNIFHFTGQNLWFFAVGVIPLAQLFALEFTSPLWVM HHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH GLAALFLGERLTRVKVAAAIIGFVGVLIVVQPGSAPFSTGMGAALLAAICFAATAIFTKR HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LTNDQSTTCILFWLTVIQLILGLIFCLYDGEMAWPDAATRPWVILIGFAGLIAHFCMTSA HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FAHAPASVVMPIDFARLPLIAVVGMLFYGEPLLLGVLIGAFLIFGANYMNILAEHRRSQR HHHCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GTP CCC >Mature Secondary Structure TDTPTTVPDLPASNVPKAAAYMIGAIFAFSAMAVAGREATVDLDTFELMTYRSVVGLVL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHH VLLVGGLTGHLPEIRTNRMPTHILRNIFHFTGQNLWFFAVGVIPLAQLFALEFTSPLWVM HHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH GLAALFLGERLTRVKVAAAIIGFVGVLIVVQPGSAPFSTGMGAALLAAICFAATAIFTKR HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LTNDQSTTCILFWLTVIQLILGLIFCLYDGEMAWPDAATRPWVILIGFAGLIAHFCMTSA HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FAHAPASVVMPIDFARLPLIAVVGMLFYGEPLLLGVLIGAFLIFGANYMNILAEHRRSQR HHHCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GTP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]