| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054830
Identifier: 89054830
GI number: 89054830
Start: 2345895
End: 2346836
Strand: Reverse
Name: 89054830
Synonym: Jann_2339
Alternate gene names: NA
Gene position: 2346836-2345895 (Counterclockwise)
Preceding gene: 89054831
Following gene: 89054829
Centisome position: 54.35
GC content: 63.27
Gene sequence:
>942_bases ATGTCCCATCGTCGCCGCCCAGATCTGAGACGCCGAGCCGTTGCGCGTGAGATCTCCTATGCCCATTCCGCATCCACGCG CAGTGGTCGCGCGGTGATCCGTGCGATAGAGAACACCACGGGGCGTCTGCGGTTGATCAAGGCGGTCGAGGGCTATGACG AGGAAGTCCGGCAGGGTCGCGACTTCTGGGATGTGATGGTGGACCGCTACCGCTTGCAGCTGATCGTCATCGGCGGATCG CTAGACAATATCCCGCGCGACGGCCCCGTCGTGCTGATCGCCAACCACCCCTACGGCATCCTCGACGGGTTGATGATGGG CCATATCCTGTCCCAAACCCGGGGCGATTTCCGCATCCTCGCCCATCAGGTGTTCCGCAAGGCCGACGATCTGAACAGGG TCATTCTGCCCGTGTCCTTCGCTGAGACGAAAGAGGCGCTGGCCCAGAACATCGCCACCCGCAAGACCGCACTGTCCTAT CTGGCCGAGGGCGGCGCGATTGGCGTCTTTCCCGGCGGCACGGTCAGCACGGCGGCCCGGCCATTCGGGCGGCCCATGGA TCCCAAATGGCGCAGCTTCACGGCGCGGATGATTGCCAAATCCGGGGCCACGGTGGTGCCGGTCTACTTCGATGGCCATA CCTCCCGGCTCTTTCAACTGATGAGCCATCTGCATTCGACCCTGCGGATGGGTCTGCTGATCAAGGAGTTCAAGGCGCGC ACCAATTCCAACGTCGATATCGTCGTCGGCGACCCGATCCCCCGCGCGGATCTGGACGCCCGTGCCGGTGACGCGACCGC GCTGATGGAGTTTCTGCGCCAAACCACATACGGGCTGTCGCCAAGGCCCCTTGACGTGCAGGCCCATGGGTTTGAATTTG ACGACAGGCATCGCGGACCCGGTGAGGCACCCGCGAAACGAAAAACAAGGGAGCGGTACTGA
Upstream 100 bases:
>100_bases GGACCTAGGCCTCCGTGATCGGCACCGTTACTTAAACGTCACTGGACCGAGCGCCTGGCAATCCTTACCTGTAGGACTGC ACGCAGCTGACAAGGCTCCC
Downstream 100 bases:
>100_bases TGGCAGTGGGAATTTTCGACAGCGGGTTGGGCGGGCTGACGGTCCTGGACGCGGTCACCAAGGCGCTGCCCGATGTGCCG CTGATCTACATGGGCGACAA
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Domain-Containing Protein; Acyltransferase Family Protein; Acyltransferase; Acyltransferase Protein; DNA Polymerase III Subunit Alpha; Phosphate Acyltransferase Family Protein; Phospholipid/Glycerol Acyltransferase Hemolysin; Sulfolipid Biosynthesis Protein SqdA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSHRRRPDLRRRAVAREISYAHSASTRSGRAVIRAIENTTGRLRLIKAVEGYDEEVRQGRDFWDVMVDRYRLQLIVIGGS LDNIPRDGPVVLIANHPYGILDGLMMGHILSQTRGDFRILAHQVFRKADDLNRVILPVSFAETKEALAQNIATRKTALSY LAEGGAIGVFPGGTVSTAARPFGRPMDPKWRSFTARMIAKSGATVVPVYFDGHTSRLFQLMSHLHSTLRMGLLIKEFKAR TNSNVDIVVGDPIPRADLDARAGDATALMEFLRQTTYGLSPRPLDVQAHGFEFDDRHRGPGEAPAKRKTRERY
Sequences:
>Translated_313_residues MSHRRRPDLRRRAVAREISYAHSASTRSGRAVIRAIENTTGRLRLIKAVEGYDEEVRQGRDFWDVMVDRYRLQLIVIGGS LDNIPRDGPVVLIANHPYGILDGLMMGHILSQTRGDFRILAHQVFRKADDLNRVILPVSFAETKEALAQNIATRKTALSY LAEGGAIGVFPGGTVSTAARPFGRPMDPKWRSFTARMIAKSGATVVPVYFDGHTSRLFQLMSHLHSTLRMGLLIKEFKAR TNSNVDIVVGDPIPRADLDARAGDATALMEFLRQTTYGLSPRPLDVQAHGFEFDDRHRGPGEAPAKRKTRERY >Mature_312_residues SHRRRPDLRRRAVAREISYAHSASTRSGRAVIRAIENTTGRLRLIKAVEGYDEEVRQGRDFWDVMVDRYRLQLIVIGGSL DNIPRDGPVVLIANHPYGILDGLMMGHILSQTRGDFRILAHQVFRKADDLNRVILPVSFAETKEALAQNIATRKTALSYL AEGGAIGVFPGGTVSTAARPFGRPMDPKWRSFTARMIAKSGATVVPVYFDGHTSRLFQLMSHLHSTLRMGLLIKEFKART NSNVDIVVGDPIPRADLDARAGDATALMEFLRQTTYGLSPRPLDVQAHGFEFDDRHRGPGEAPAKRKTRERY
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35013; Mature: 34881
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHRRRPDLRRRAVAREISYAHSASTRSGRAVIRAIENTTGRLRLIKAVEGYDEEVRQGR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEHHHHCCHHHHHCCC DFWDVMVDRYRLQLIVIGGSLDNIPRDGPVVLIANHPYGILDGLMMGHILSQTRGDFRIL HHHHHHHHHEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHH AHQVFRKADDLNRVILPVSFAETKEALAQNIATRKTALSYLAEGGAIGVFPGGTVSTAAR HHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHC PFGRPMDPKWRSFTARMIAKSGATVVPVYFDGHTSRLFQLMSHLHSTLRMGLLIKEFKAR CCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TNSNVDIVVGDPIPRADLDARAGDATALMEFLRQTTYGLSPRPLDVQAHGFEFDDRHRGP CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC GEAPAKRKTRERY CCCCHHHHHHCCC >Mature Secondary Structure SHRRRPDLRRRAVAREISYAHSASTRSGRAVIRAIENTTGRLRLIKAVEGYDEEVRQGR CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEHHHHCCHHHHHCCC DFWDVMVDRYRLQLIVIGGSLDNIPRDGPVVLIANHPYGILDGLMMGHILSQTRGDFRIL HHHHHHHHHEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHH AHQVFRKADDLNRVILPVSFAETKEALAQNIATRKTALSYLAEGGAIGVFPGGTVSTAAR HHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHC PFGRPMDPKWRSFTARMIAKSGATVVPVYFDGHTSRLFQLMSHLHSTLRMGLLIKEFKAR CCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TNSNVDIVVGDPIPRADLDARAGDATALMEFLRQTTYGLSPRPLDVQAHGFEFDDRHRGP CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC GEAPAKRKTRERY CCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA