Click here to switch to the map view.

The map label for this gene is 89054825

Identifier: 89054825

GI number: 89054825

Start: 2342126

End: 2342737

Strand: Reverse

Name: 89054825

Synonym: Jann_2334

Alternate gene names: NA

Gene position: 2342737-2342126 (Counterclockwise)

Preceding gene: 89054826

Following gene: 89054824

Centisome position: 54.26

GC content: 63.56

Gene sequence:

>612_bases
ATGCAGTCGGTTCGGTCTATCGCAGAAACTATCGTGGCCCGAGAGGGCGGATTCGTGAACGATCCCGATGATCCGGGCGG
CGCGACCAAACATGGTGTGACGATCCACACGATGCGGTCCCTGGGCCTTGATCTGGACGGCGACGGGGACGTTGACGTGG
CCGATGTGCGTCGCATCACACCGCAGATCGCGACCGATCTGTTTCTGGAGCATTACTTCAACCGGCCCAATATCCACATG
CTGCCCGAGCCCTTGCAGGCGTCGGTCTTTGACATGCAGGTCAATGCGGGCTCCAACGCGGTGCGGATCCTGCAGCGTCT
GTTGCGGGACATGGGCCTCGACATTGCCGTGGATGGCGCGATTGGCCCGCAAACGGCGCGCGCGGCCTATGCCGCCTTGG
GCGATGCGCCCGATCATCTGGTGGACGCTTACGGCATTGCGCGGCGCAATTATTACTACCGGATCGGCGACCGCAGGCCC
GCCTCGCGCAAATATGCGCGGCGGCGGAATGGCGGGAAGGGCGGCTGGATCGTGCGGGCGGAGGAGTTCATTTCGCCGCG
CTATCACCTGACCCTCGCGCAACACCGTGAAAGGACGGCGTCATGGGGTTGA

Upstream 100 bases:

>100_bases
TTTGGCTCTCCGACAACTTTGTCGAAAGATGTTAGGGATTTGTTAACCCCGCCAGTGTTCTCTCAGATCTTCCGAAACAC
TGAGCATGGAGGGCGAACCC

Downstream 100 bases:

>100_bases
TTGATCGCGCATTGGGGGGTGGGTCGGCGGCCCAAGGGATCGGCGAAGCGGCGGAGGGCCTGTCGGAGGTGTTCATCCCC
AACGCCACACGCGCCATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MQSVRSIAETIVAREGGFVNDPDDPGGATKHGVTIHTMRSLGLDLDGDGDVDVADVRRITPQIATDLFLEHYFNRPNIHM
LPEPLQASVFDMQVNAGSNAVRILQRLLRDMGLDIAVDGAIGPQTARAAYAALGDAPDHLVDAYGIARRNYYYRIGDRRP
ASRKYARRRNGGKGGWIVRAEEFISPRYHLTLAQHRERTASWG

Sequences:

>Translated_203_residues
MQSVRSIAETIVAREGGFVNDPDDPGGATKHGVTIHTMRSLGLDLDGDGDVDVADVRRITPQIATDLFLEHYFNRPNIHM
LPEPLQASVFDMQVNAGSNAVRILQRLLRDMGLDIAVDGAIGPQTARAAYAALGDAPDHLVDAYGIARRNYYYRIGDRRP
ASRKYARRRNGGKGGWIVRAEEFISPRYHLTLAQHRERTASWG
>Mature_203_residues
MQSVRSIAETIVAREGGFVNDPDDPGGATKHGVTIHTMRSLGLDLDGDGDVDVADVRRITPQIATDLFLEHYFNRPNIHM
LPEPLQASVFDMQVNAGSNAVRILQRLLRDMGLDIAVDGAIGPQTARAAYAALGDAPDHLVDAYGIARRNYYYRIGDRRP
ASRKYARRRNGGKGGWIVRAEEFISPRYHLTLAQHRERTASWG

Specific function: Unknown

COG id: COG3926

COG function: function code R; Putative secretion activating protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22507; Mature: 22507

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSVRSIAETIVAREGGFVNDPDDPGGATKHGVTIHTMRSLGLDLDGDGDVDVADVRRIT
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHH
PQIATDLFLEHYFNRPNIHMLPEPLQASVFDMQVNAGSNAVRILQRLLRDMGLDIAVDGA
HHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEECCC
IGPQTARAAYAALGDAPDHLVDAYGIARRNYYYRIGDRRPASRKYARRRNGGKGGWIVRA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEH
EEFISPRYHLTLAQHRERTASWG
HHHCCCCEEEHHHHHHHHCCCCC
>Mature Secondary Structure
MQSVRSIAETIVAREGGFVNDPDDPGGATKHGVTIHTMRSLGLDLDGDGDVDVADVRRIT
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHH
PQIATDLFLEHYFNRPNIHMLPEPLQASVFDMQVNAGSNAVRILQRLLRDMGLDIAVDGA
HHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEECCC
IGPQTARAAYAALGDAPDHLVDAYGIARRNYYYRIGDRRPASRKYARRRNGGKGGWIVRA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEH
EEFISPRYHLTLAQHRERTASWG
HHHCCCCEEEHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA