| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is bcsP31 [H]
Identifier: 89054822
GI number: 89054822
Start: 2339047
End: 2340015
Strand: Reverse
Name: bcsP31 [H]
Synonym: Jann_2331
Alternate gene names: 89054822
Gene position: 2340015-2339047 (Counterclockwise)
Preceding gene: 89054824
Following gene: 89054821
Centisome position: 54.19
GC content: 65.12
Gene sequence:
>969_bases ATGAACAAACAATTGGTTGGCGCGCTTGTCGCGGCCACAACACTCTTTGGCGCGGGCACGGCCAGCGCTCAGGACACCTT TATCGCCATCGGCACGGGCGGCGTGACGGGCGTTTATTACCCGACTGGCGGCGCGATCTGCCGCCTTGTGAACCGCGACC GCGCGGACCACGGCATTCGTTGCGGCGTGGAATCCACCGGCGGCTCGGTCTTCAACATCAACGCCATTCGCGGCGGTGAG CTTGAGTTCGGCGTGGCCCAGTCCGACTGGCAGTACCACGCGTTCAACGGCACGTCCCGCTTTGAGGAGCAGGGCGCGAT GGAAGAACTCCGCGCTGTCTTCTCGGTCCACCCCGAGCCATTCACGGTTGTGGCGCGTGCCGATGCGGGCATCACCAACT TTGCGGACCTGCAGGGCATGCGCGTAAATGTCGGCAACCCCGGATCGGGCCAGCGCGGCACGATGGAAGTGCTGATGGGT GCCCTTGGCTGGACGATGGACGACTTCGCCGTCGCGTCCGAGTTGCAGGCGGCCGAGCAGTCCCAGGCGCTGTGCGACAA CAACATCGACGCGATGATCTACACCGTGGGTCACCCCTCGGGCTCCATCCAGGAGGCCACCACAGCCTGTGACAGCATCT TGGTCAACGTGACCGGCGACGCCGTGGATGGCCTGGTGGAGGAAAACTCCTTCTACCGCACCGCCACGATCCCCGGCGGC ATGTATCGCGGGTCTGACGACGACGTGACGACCTTCGGCGTCGGCGCGACCTTCGTGACCTCGGCGGATGTGCCCGAAGA GGTGGTCTACACCGTGGTGGCGGCTGTGTTCGAGAATATCGACACCTTCCGTGGCCTGCACCCCGCGTTTGCCAACCTCG ACCCGGCGCAGATGGCCAATGACGGCCTGTCCGCGCCCCTGCACCCCGGTGCAGAGCGGTATTTCCGCGAGGCTGGCCTG ATCGAGTGA
Upstream 100 bases:
>100_bases AGCAAATATGCCGGTCACGCGAACTTGACACTTATCACTGATCTTTCCATGCTCCGATCAGTCTGAAGAACCAAATCTGC CAGACCAACGGGAGAATATC
Downstream 100 bases:
>100_bases TCGGCCTCTAGACGATCTGGCTGCGGGCGGACCCATCTGCCCGCAGCCCCAAAAAAACGACAAAAAACGCGCAAGGGGAC GGCCCGATGAGTGATCAAGG
Product: TRAP transporter solute receptor TAXI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MNKQLVGALVAATTLFGAGTASAQDTFIAIGTGGVTGVYYPTGGAICRLVNRDRADHGIRCGVESTGGSVFNINAIRGGE LEFGVAQSDWQYHAFNGTSRFEEQGAMEELRAVFSVHPEPFTVVARADAGITNFADLQGMRVNVGNPGSGQRGTMEVLMG ALGWTMDDFAVASELQAAEQSQALCDNNIDAMIYTVGHPSGSIQEATTACDSILVNVTGDAVDGLVEENSFYRTATIPGG MYRGSDDDVTTFGVGATFVTSADVPEEVVYTVVAAVFENIDTFRGLHPAFANLDPAQMANDGLSAPLHPGAERYFREAGL IE
Sequences:
>Translated_322_residues MNKQLVGALVAATTLFGAGTASAQDTFIAIGTGGVTGVYYPTGGAICRLVNRDRADHGIRCGVESTGGSVFNINAIRGGE LEFGVAQSDWQYHAFNGTSRFEEQGAMEELRAVFSVHPEPFTVVARADAGITNFADLQGMRVNVGNPGSGQRGTMEVLMG ALGWTMDDFAVASELQAAEQSQALCDNNIDAMIYTVGHPSGSIQEATTACDSILVNVTGDAVDGLVEENSFYRTATIPGG MYRGSDDDVTTFGVGATFVTSADVPEEVVYTVVAAVFENIDTFRGLHPAFANLDPAQMANDGLSAPLHPGAERYFREAGL IE >Mature_322_residues MNKQLVGALVAATTLFGAGTASAQDTFIAIGTGGVTGVYYPTGGAICRLVNRDRADHGIRCGVESTGGSVFNINAIRGGE LEFGVAQSDWQYHAFNGTSRFEEQGAMEELRAVFSVHPEPFTVVARADAGITNFADLQGMRVNVGNPGSGQRGTMEVLMG ALGWTMDDFAVASELQAAEQSQALCDNNIDAMIYTVGHPSGSIQEATTACDSILVNVTGDAVDGLVEENSFYRTATIPGG MYRGSDDDVTTFGVGATFVTSADVPEEVVYTVVAAVFENIDTFRGLHPAFANLDPAQMANDGLSAPLHPGAERYFREAGL IE
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 33871; Mature: 33871
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQLVGALVAATTLFGAGTASAQDTFIAIGTGGVTGVYYPTGGAICRLVNRDRADHGIR CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECCCHHEEEECCCCCCCCCEE CGVESTGGSVFNINAIRGGELEFGVAQSDWQYHAFNGTSRFEEQGAMEELRAVFSVHPEP ECEECCCCCEEEEEEEECCCEEEEEECCCCEEEEECCCHHHHHCCHHHHHHHHHHCCCCC FTVVARADAGITNFADLQGMRVNVGNPGSGQRGTMEVLMGALGWTMDDFAVASELQAAEQ EEEEEECCCCCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH SQALCDNNIDAMIYTVGHPSGSIQEATTACDSILVNVTGDAVDGLVEENSFYRTATIPGG HHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHEEEEECCHHHHHHHCCCCEEEEEECCCC MYRGSDDDVTTFGVGATFVTSADVPEEVVYTVVAAVFENIDTFRGLHPAFANLDPAQMAN CCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHC DGLSAPLHPGAERYFREAGLIE CCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MNKQLVGALVAATTLFGAGTASAQDTFIAIGTGGVTGVYYPTGGAICRLVNRDRADHGIR CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECCCHHEEEECCCCCCCCCEE CGVESTGGSVFNINAIRGGELEFGVAQSDWQYHAFNGTSRFEEQGAMEELRAVFSVHPEP ECEECCCCCEEEEEEEECCCEEEEEECCCCEEEEECCCHHHHHCCHHHHHHHHHHCCCCC FTVVARADAGITNFADLQGMRVNVGNPGSGQRGTMEVLMGALGWTMDDFAVASELQAAEQ EEEEEECCCCCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH SQALCDNNIDAMIYTVGHPSGSIQEATTACDSILVNVTGDAVDGLVEENSFYRTATIPGG HHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHEEEEECCHHHHHHHCCCCEEEEEECCCC MYRGSDDDVTTFGVGATFVTSADVPEEVVYTVVAAVFENIDTFRGLHPAFANLDPAQMAN CCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHC DGLSAPLHPGAERYFREAGLIE CCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]