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The map label for this gene is arrD [H]

Identifier: 89054812

GI number: 89054812

Start: 2324353

End: 2325378

Strand: Reverse

Name: arrD [H]

Synonym: Jann_2321

Alternate gene names: 89054812

Gene position: 2325378-2324353 (Counterclockwise)

Preceding gene: 89054813

Following gene: 89054811

Centisome position: 53.85

GC content: 63.65

Gene sequence:

>1026_bases
ATGCATATCAGTCATTTGGGATTGTCCCTGATCAAGCATTTCGAAGGTCAGTATTTGACCACGTATATTGACCCGGTCGG
CGTGGCGACCATCGGCTATGGCCATACGGGCGACCACGCGATCCCCGGCAATACGATCACCGAGGCGCAGGCCCTTGAGA
TCCTGGAAGAGGATCTGTCCGGCCACGTGGCGTCCGTCAGGAAACACACCGACATCGCGGTGGAGCAGCATCAGTTCGAC
GCCCTCGTCTCCTTTGCCTTCAACGTCGGAAACCTCGCCTATTTCAACTCGACCCTGCGCAGGCTGCTGAATGACCGCGA
CCGCAACGGGGCGGCGGATCAGTTCCTGCGCTGGGACAAGGGCACGGTGGACGGCCGAAAGATCGTGCTGCCGGGCCTGA
GCCGTCGCCGCAAGGCGGAGCGGCATCTGTTCAACACCGGAGAGGTCGATTTCTTTGACGGCCACGGGGTGCAGACGGTC
GCGCCCGATCCCGCATCCCCCTCCGATACGCCGCCAGAACCCGCACCGCAGCCGACCCCCACGCCGGTGCCGCGTCCGAC
GCCAAATGCCACCTCGCCCCATCAATACGCCGCTGACCTCAACGCGACGCTCGTGGCCTGGGGCGTGACACATTTCAACG
CCGCCGAATTGATGGAGATGGGCGCGTCCAACGCCACCCCGGGAAGCCCCGCCTATGGCACCAACGCGCTGCCGCCGCGC
GACGTGTGGGACAATATGCGGCGCACCATCCAGATGCTTGATCGGCTGCGGGAGGTGCTGGATCAGCCGATCCACATCCT
CTCGGGCTATCGCAGCCCGGCCTACAACCAGCTTGTGGGGGGCGTGCCCAACAGCCTGCATGTCCAGTTCAACGCGATTG
ATTTCTACGTTGGCGGGGCCACGCGTCCGGCCCATTGGGCGGCGGTTCTCAAGGACATGCGCGTGGCCGGAGAGTTCAGG
GGCGGCATCGGGATCTACAGCAGTTTCGTGCATATCGACACGCGGGGTCAGAACGCGGATTGGTAA

Upstream 100 bases:

>100_bases
CGGTCTTCGCCAAGGGCTAAGCGGCGCGGTTTTTCAACCGAAAATCCCCGAATTGTGGTAAGAGATCCTTTTTATTCTGG
TTCAGAGAAAGGGTTTTTTT

Downstream 100 bases:

>100_bases
AGGCGCAGCCGGGTCGCGGCGTCCCATTGCGGGGCAGGCAGGCCCGCGTTAAAAGCGCCCCAGATGCATCAAAGGCCGCT
CTACGATGTCCGAGTCTTCC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MHISHLGLSLIKHFEGQYLTTYIDPVGVATIGYGHTGDHAIPGNTITEAQALEILEEDLSGHVASVRKHTDIAVEQHQFD
ALVSFAFNVGNLAYFNSTLRRLLNDRDRNGAADQFLRWDKGTVDGRKIVLPGLSRRRKAERHLFNTGEVDFFDGHGVQTV
APDPASPSDTPPEPAPQPTPTPVPRPTPNATSPHQYAADLNATLVAWGVTHFNAAELMEMGASNATPGSPAYGTNALPPR
DVWDNMRRTIQMLDRLREVLDQPIHILSGYRSPAYNQLVGGVPNSLHVQFNAIDFYVGGATRPAHWAAVLKDMRVAGEFR
GGIGIYSSFVHIDTRGQNADW

Sequences:

>Translated_341_residues
MHISHLGLSLIKHFEGQYLTTYIDPVGVATIGYGHTGDHAIPGNTITEAQALEILEEDLSGHVASVRKHTDIAVEQHQFD
ALVSFAFNVGNLAYFNSTLRRLLNDRDRNGAADQFLRWDKGTVDGRKIVLPGLSRRRKAERHLFNTGEVDFFDGHGVQTV
APDPASPSDTPPEPAPQPTPTPVPRPTPNATSPHQYAADLNATLVAWGVTHFNAAELMEMGASNATPGSPAYGTNALPPR
DVWDNMRRTIQMLDRLREVLDQPIHILSGYRSPAYNQLVGGVPNSLHVQFNAIDFYVGGATRPAHWAAVLKDMRVAGEFR
GGIGIYSSFVHIDTRGQNADW
>Mature_341_residues
MHISHLGLSLIKHFEGQYLTTYIDPVGVATIGYGHTGDHAIPGNTITEAQALEILEEDLSGHVASVRKHTDIAVEQHQFD
ALVSFAFNVGNLAYFNSTLRRLLNDRDRNGAADQFLRWDKGTVDGRKIVLPGLSRRRKAERHLFNTGEVDFFDGHGVQTV
APDPASPSDTPPEPAPQPTPTPVPRPTPNATSPHQYAADLNATLVAWGVTHFNAAELMEMGASNATPGSPAYGTNALPPR
DVWDNMRRTIQMLDRLREVLDQPIHILSGYRSPAYNQLVGGVPNSLHVQFNAIDFYVGGATRPAHWAAVLKDMRVAGEFR
GGIGIYSSFVHIDTRGQNADW

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=135, Percent_Identity=35.5555555555556, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 37366; Mature: 37366

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISHLGLSLIKHFEGQYLTTYIDPVGVATIGYGHTGDHAIPGNTITEAQALEILEEDLS
CCCHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GHVASVRKHTDIAVEQHQFDALVSFAFNVGNLAYFNSTLRRLLNDRDRNGAADQFLRWDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
GTVDGRKIVLPGLSRRRKAERHLFNTGEVDFFDGHGVQTVAPDPASPSDTPPEPAPQPTP
CCCCCCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCC
TPVPRPTPNATSPHQYAADLNATLVAWGVTHFNAAELMEMGASNATPGSPAYGTNALPPR
CCCCCCCCCCCCCHHHHHCCCCEEEEECCHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCH
DVWDNMRRTIQMLDRLREVLDQPIHILSGYRSPAYNQLVGGVPNSLHVQFNAIDFYVGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEEEEEEECCC
TRPAHWAAVLKDMRVAGEFRGGIGIYSSFVHIDTRGQNADW
CCHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCCCCCC
>Mature Secondary Structure
MHISHLGLSLIKHFEGQYLTTYIDPVGVATIGYGHTGDHAIPGNTITEAQALEILEEDLS
CCCHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GHVASVRKHTDIAVEQHQFDALVSFAFNVGNLAYFNSTLRRLLNDRDRNGAADQFLRWDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
GTVDGRKIVLPGLSRRRKAERHLFNTGEVDFFDGHGVQTVAPDPASPSDTPPEPAPQPTP
CCCCCCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCC
TPVPRPTPNATSPHQYAADLNATLVAWGVTHFNAAELMEMGASNATPGSPAYGTNALPPR
CCCCCCCCCCCCCHHHHHCCCCEEEEECCHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCH
DVWDNMRRTIQMLDRLREVLDQPIHILSGYRSPAYNQLVGGVPNSLHVQFNAIDFYVGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEEEEEEECCC
TRPAHWAAVLKDMRVAGEFRGGIGIYSSFVHIDTRGQNADW
CCHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]