| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is phoU [H]
Identifier: 89054784
GI number: 89054784
Start: 2300062
End: 2300772
Strand: Direct
Name: phoU [H]
Synonym: Jann_2293
Alternate gene names: 89054784
Gene position: 2300062-2300772 (Clockwise)
Preceding gene: 89054783
Following gene: 89054785
Centisome position: 53.27
GC content: 60.48
Gene sequence:
>711_bases ATGCCACAGTCAGATCACATCGTCAGCGCCTTTGACCGCGACCTCGAAGGCATTCAGGACAGGATCATGCGCATGGGCGG GTTGGTGGAGGAGGCGATTTCGCTGTCTGCCACGGCGCTTCAGACCGGCGATATCGAGTTGGCGGCCCGCGTCCGCAAGG CCGACAAGGTCATCGACGCGCTGGAGTTGGAGGTGAATGAGGAGGCCGCCCGCATCATCGCGCTGCGCCAGCCCATCGCG TCCGACCTGCGTACCGTTCTGTCGATCTTCCGCGTCTCTGCCAATCTGGAGCGGATCGGGGATTATGCCAAGAACATCGC CAAACGGTCCCAGGCGGTGATTGAGTTGCCGTCCGTTCCCGGCGATACAACGTCGCTCAAGCGCCTTGCGCGGCAGGTGG AACTGATGCTGAAAGACGCTCTGGATGCCTATATTCAGAAGGATGCGGTTCTGGCCGAGGATGTGCGCCAACGCGACCTA GAAGTCGACCGCCTCTATTCCGCGCTGTTTCGGGAATATCTGACCCACATGATGGAAGATCCGCGCCACATCACCGCCTG CATGCACATGCATTTCATGGCCAAGAATATCGAGCGGATGGGCGACCACGTGACCTCCGTGGCCGAACAGGTCATATATC TGGTGACCGGCGAGATGCCGGACGAGGACCGCCCGAAAGAAGACAAGACCCCCTACGTGCAAGGGGCCTGA
Upstream 100 bases:
>100_bases CCTCGGCAACCTCGTGGAATTTGACGAGACCGACAAGATTTTCACCAACCCCAGCGATCCCCGCACGGAAAGCTACATTA CGGGCCGGATTGGATAACAG
Downstream 100 bases:
>100_bases CCCATGGCCGGTGAACCCCTTGTTCTGGTGGTGGAGGATGAGCCCGCGCAGCGCGAGGTTTTGGCCTATAACATCCGGGC CGAGGGCTTTGACGTCGTGA
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MPQSDHIVSAFDRDLEGIQDRIMRMGGLVEEAISLSATALQTGDIELAARVRKADKVIDALELEVNEEAARIIALRQPIA SDLRTVLSIFRVSANLERIGDYAKNIAKRSQAVIELPSVPGDTTSLKRLARQVELMLKDALDAYIQKDAVLAEDVRQRDL EVDRLYSALFREYLTHMMEDPRHITACMHMHFMAKNIERMGDHVTSVAEQVIYLVTGEMPDEDRPKEDKTPYVQGA
Sequences:
>Translated_236_residues MPQSDHIVSAFDRDLEGIQDRIMRMGGLVEEAISLSATALQTGDIELAARVRKADKVIDALELEVNEEAARIIALRQPIA SDLRTVLSIFRVSANLERIGDYAKNIAKRSQAVIELPSVPGDTTSLKRLARQVELMLKDALDAYIQKDAVLAEDVRQRDL EVDRLYSALFREYLTHMMEDPRHITACMHMHFMAKNIERMGDHVTSVAEQVIYLVTGEMPDEDRPKEDKTPYVQGA >Mature_235_residues PQSDHIVSAFDRDLEGIQDRIMRMGGLVEEAISLSATALQTGDIELAARVRKADKVIDALELEVNEEAARIIALRQPIAS DLRTVLSIFRVSANLERIGDYAKNIAKRSQAVIELPSVPGDTTSLKRLARQVELMLKDALDAYIQKDAVLAEDVRQRDLE VDRLYSALFREYLTHMMEDPRHITACMHMHFMAKNIERMGDHVTSVAEQVIYLVTGEMPDEDRPKEDKTPYVQGA
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=213, Percent_Identity=38.9671361502347, Blast_Score=146, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26603; Mature: 26472
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSDHIVSAFDRDLEGIQDRIMRMGGLVEEAISLSATALQTGDIELAARVRKADKVIDA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LELEVNEEAARIIALRQPIASDLRTVLSIFRVSANLERIGDYAKNIAKRSQAVIELPSVP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC GDTTSLKRLARQVELMLKDALDAYIQKDAVLAEDVRQRDLEVDRLYSALFREYLTHMMED CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC PRHITACMHMHFMAKNIERMGDHVTSVAEQVIYLVTGEMPDEDRPKEDKTPYVQGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PQSDHIVSAFDRDLEGIQDRIMRMGGLVEEAISLSATALQTGDIELAARVRKADKVIDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LELEVNEEAARIIALRQPIASDLRTVLSIFRVSANLERIGDYAKNIAKRSQAVIELPSVP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC GDTTSLKRLARQVELMLKDALDAYIQKDAVLAEDVRQRDLEVDRLYSALFREYLTHMMED CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC PRHITACMHMHFMAKNIERMGDHVTSVAEQVIYLVTGEMPDEDRPKEDKTPYVQGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]