| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054770
Identifier: 89054770
GI number: 89054770
Start: 2285669
End: 2286559
Strand: Direct
Name: 89054770
Synonym: Jann_2279
Alternate gene names: NA
Gene position: 2285669-2286559 (Clockwise)
Preceding gene: 89054769
Following gene: 89054771
Centisome position: 52.93
GC content: 64.31
Gene sequence:
>891_bases ATGATCCGCATTGCAACCTTGTCACTGGCCGTGGCCGTCTCTGGGGGCGTTGCGGCTGGCGCTTGGGTCACCCCGCCAGC CCAGGCGCAAGAGGTGCAGGCTGCCCGCTCGATCATCCTCGCCGATGAGGCGCCGGATCTGCACCGGTTGCTCGACACAA TGGGGATGTATGAGATTATCGCGCTGATTGGCACCGAGGGCCTGCGCGGGGCGGCGGATGTGGAAGACCAGCTCTTTCCC GAGGCGGGCGGCGCGGCTTGGCGCGCAACCGTCATGGGGCTGCACGGGACCGACCGGATGGTCGGCCTGTTTGAGGAGGC GTTCAATCGCGATGGCGTCACGCCTGCACAGATCGCCGAGGTGCAGGCCTTCTTGGACACTGATATTGGCCGCCGTCTGA TCGCTGGCGAAGTGGCGGCGCGCCGTGCATTTCTGGACGATGACGCCGTGGCCGCCGCGACAGATATCTTCATGACGGCC GTGCAGGGTGAGGACCCGCGGCTCGACCTGCTGCGGCGGGTCAATGAGGTCAACGGGCTGATTGATCGCAACGTCTCGGG CGCATTGAACCTGCGGTTTTCCTTCTACCGGGGGCTGATCGACGGCGGCGCGTTTGACAATGACGTGCCCGAGGACCTGA TGCTGGCCGAGGTTTGGGGGCATGAGCCCGAGGTGCGGCAGGCCACGGTCGAACGGTTGTTCTCCTTCCAGCTCCTCGCC TATTCGGGTGCGTCCGACGCAGATCTGGAGGCTTATATAGAGATTGCCGCATCGCCTGCTGGACGGGCGGTGAACGCCGC GTTGTTTTCAGCGTTCGACGAGATGCTGGCACAGCTCAGCTACGATCTGGGCTATGCTGCTGCGGGCTTCATCGCGGGTG AAGATACCTGA
Upstream 100 bases:
>100_bases GCAGGAAAAATGCGCCCAAAGACTGGTCCAGCTCGCACGACCCGTAGATTTCGCCCGAGAAAGCAGGCATCGTGCGGCAG TCGTTAGAGGGGACGCCACA
Downstream 100 bases:
>100_bases CGCCACTAGGAGGTGCGTGGCGCAGGCGACGTTGATTGGACCGATTTGATCCGCATTCCCAACCGCCGCGATGGGCCGGG TGCGCCATGGACCAAACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MIRIATLSLAVAVSGGVAAGAWVTPPAQAQEVQAARSIILADEAPDLHRLLDTMGMYEIIALIGTEGLRGAADVEDQLFP EAGGAAWRATVMGLHGTDRMVGLFEEAFNRDGVTPAQIAEVQAFLDTDIGRRLIAGEVAARRAFLDDDAVAAATDIFMTA VQGEDPRLDLLRRVNEVNGLIDRNVSGALNLRFSFYRGLIDGGAFDNDVPEDLMLAEVWGHEPEVRQATVERLFSFQLLA YSGASDADLEAYIEIAASPAGRAVNAALFSAFDEMLAQLSYDLGYAAAGFIAGEDT
Sequences:
>Translated_296_residues MIRIATLSLAVAVSGGVAAGAWVTPPAQAQEVQAARSIILADEAPDLHRLLDTMGMYEIIALIGTEGLRGAADVEDQLFP EAGGAAWRATVMGLHGTDRMVGLFEEAFNRDGVTPAQIAEVQAFLDTDIGRRLIAGEVAARRAFLDDDAVAAATDIFMTA VQGEDPRLDLLRRVNEVNGLIDRNVSGALNLRFSFYRGLIDGGAFDNDVPEDLMLAEVWGHEPEVRQATVERLFSFQLLA YSGASDADLEAYIEIAASPAGRAVNAALFSAFDEMLAQLSYDLGYAAAGFIAGEDT >Mature_296_residues MIRIATLSLAVAVSGGVAAGAWVTPPAQAQEVQAARSIILADEAPDLHRLLDTMGMYEIIALIGTEGLRGAADVEDQLFP EAGGAAWRATVMGLHGTDRMVGLFEEAFNRDGVTPAQIAEVQAFLDTDIGRRLIAGEVAARRAFLDDDAVAAATDIFMTA VQGEDPRLDLLRRVNEVNGLIDRNVSGALNLRFSFYRGLIDGGAFDNDVPEDLMLAEVWGHEPEVRQATVERLFSFQLLA YSGASDADLEAYIEIAASPAGRAVNAALFSAFDEMLAQLSYDLGYAAAGFIAGEDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31552; Mature: 31552
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIATLSLAVAVSGGVAAGAWVTPPAQAQEVQAARSIILADEAPDLHRLLDTMGMYEII CEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH ALIGTEGLRGAADVEDQLFPEAGGAAWRATVMGLHGTDRMVGLFEEAFNRDGVTPAQIAE HHHCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHH VQAFLDTDIGRRLIAGEVAARRAFLDDDAVAAATDIFMTAVQGEDPRLDLLRRVNEVNGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IDRNVSGALNLRFSFYRGLIDGGAFDNDVPEDLMLAEVWGHEPEVRQATVERLFSFQLLA HCCCCCCEEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEE YSGASDADLEAYIEIAASPAGRAVNAALFSAFDEMLAQLSYDLGYAAAGFIAGEDT ECCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC >Mature Secondary Structure MIRIATLSLAVAVSGGVAAGAWVTPPAQAQEVQAARSIILADEAPDLHRLLDTMGMYEII CEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH ALIGTEGLRGAADVEDQLFPEAGGAAWRATVMGLHGTDRMVGLFEEAFNRDGVTPAQIAE HHHCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHH VQAFLDTDIGRRLIAGEVAARRAFLDDDAVAAATDIFMTAVQGEDPRLDLLRRVNEVNGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IDRNVSGALNLRFSFYRGLIDGGAFDNDVPEDLMLAEVWGHEPEVRQATVERLFSFQLLA HCCCCCCEEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEE YSGASDADLEAYIEIAASPAGRAVNAALFSAFDEMLAQLSYDLGYAAAGFIAGEDT ECCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA