| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054701
Identifier: 89054701
GI number: 89054701
Start: 2217664
End: 2218062
Strand: Direct
Name: 89054701
Synonym: Jann_2210
Alternate gene names: NA
Gene position: 2217664-2218062 (Clockwise)
Preceding gene: 89054700
Following gene: 89054702
Centisome position: 51.36
GC content: 61.4
Gene sequence:
>399_bases ATGAGCGAAGATACCAACAAAAGCGCCGGTGGCCTTCTATCTGACGCCCTCGGCAATGTCAGTGGTCTGGTGCGCAGCGA AGTTGATCTGGCGCGCGCCGAAATCAGCGAAAACCTGACCAAAGCGGGCGTCGCCGTGGGCCTGATCGCCGGGGCCGCCA TTATCGCGCTGGTCGCGCTGAATGTGTTGGCCGCCGCCCTCGTGGCCGCGCTGACCGAAGCCGGAATAGACGCTGGCTGG TCCGCGCTGATCGTGGGTGCGATCCTTGCCATAGTGGCATTTGTCCTGATGGGCAAAGGGATCAACGACCTCAAACTCTC AAGCCTCGCCCCCACACGCACCGTGAAGAACGTGCAGCGCGATGCAGCAGCCGTGAAGGACGCATACGATGACAAATGA
Upstream 100 bases:
>100_bases GCTTTGCAGCCACGCGCTTTGCCAAGGCCTCCAATGAGGCAGCGTCCCAGGTTGCGCACACACCGGTGTCACCCACCACA CCCACAACGGGGGATTTCTC
Downstream 100 bases:
>100_bases ACACCGCAGCCCCGAAGAGATCGAGCGCGAGATTGAAGAGAAGCGCTCGGACCTGACATCAAACCTTGAGGATTTGCAGG ACAAATTCTCAATCGACACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSEDTNKSAGGLLSDALGNVSGLVRSEVDLARAEISENLTKAGVAVGLIAGAAIIALVALNVLAAALVAALTEAGIDAGW SALIVGAILAIVAFVLMGKGINDLKLSSLAPTRTVKNVQRDAAAVKDAYDDK
Sequences:
>Translated_132_residues MSEDTNKSAGGLLSDALGNVSGLVRSEVDLARAEISENLTKAGVAVGLIAGAAIIALVALNVLAAALVAALTEAGIDAGW SALIVGAILAIVAFVLMGKGINDLKLSSLAPTRTVKNVQRDAAAVKDAYDDK >Mature_131_residues SEDTNKSAGGLLSDALGNVSGLVRSEVDLARAEISENLTKAGVAVGLIAGAAIIALVALNVLAAALVAALTEAGIDAGWS ALIVGAILAIVAFVLMGKGINDLKLSSLAPTRTVKNVQRDAAAVKDAYDDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13226; Mature: 13095
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDTNKSAGGLLSDALGNVSGLVRSEVDLARAEISENLTKAGVAVGLIAGAAIIALVAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVLAAALVAALTEAGIDAGWSALIVGAILAIVAFVLMGKGINDLKLSSLAPTRTVKNVQR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH DAAAVKDAYDDK HHHHHHHHCCCC >Mature Secondary Structure SEDTNKSAGGLLSDALGNVSGLVRSEVDLARAEISENLTKAGVAVGLIAGAAIIALVAL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVLAAALVAALTEAGIDAGWSALIVGAILAIVAFVLMGKGINDLKLSSLAPTRTVKNVQR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH DAAAVKDAYDDK HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA