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The map label for this gene is viuB [H]

Identifier: 89054617

GI number: 89054617

Start: 2135159

End: 2135992

Strand: Direct

Name: viuB [H]

Synonym: Jann_2126

Alternate gene names: 89054617

Gene position: 2135159-2135992 (Clockwise)

Preceding gene: 89054616

Following gene: 89054624

Centisome position: 49.45

GC content: 63.43

Gene sequence:

>834_bases
ATGCCGAACGACCTGACGCCCCCAAAACCCACACCGCAAAAGCGCATCAGTTGCGTCCTGACCGTATCGCGGGCGTGGCG
GGTGACCCCGAACATGATCCGCGTGACCCTGACCGGACCTGAGATCGCCGACATTCCCGCGTCAATCGCAGGCGGTCATT
GCAAAATCCTGTTGCCCGCTGCGGGCCAAAGCCCTGCGGATTTGACGCGCGCCATGGCAGAAGGACCGAAGCCCACCACG
CGGACCTATACGATCCGCCATGCGCGACCCGAGGCCTGTGAGATCGACATTGATTTCGTGGCCCACGGCGACAACGGCCC
GGCTTCCGCCTGGGCGGCACGCGTACAGCCCGGCGACATACTGGGATTTGCCGGTCCGGGCCAGCCGAAATTGACGGACA
TGACCGCGGATTACTATCTGATTGCCGCCGATATGTCGGCCCTGCCGGTGGCTCTCGCAGGGTTGGAGGCCTTGCCGAAA
GACGCCAAAGGCATCGCGATCTTCGAGGTGCAGAGCGCCGAGGACCGCCAACACATCAACGCACCCGCAGGCATCGCGCA
GCACTGGCTGATCCATGCCCATCCTGAGGAGCAATCGGCGCAGCAGACGGATTTGATCCAACGGCTCACTCTGCCGGATG
GGCGTATCAAAACACTCGTCGCCGGTGAAACTGGTGTGATCCGCGCGTTGCGGTTGCATCTGCGCGGCGAACGCGCACTG
CCGCGAGCGGACGTCTACGCCTCGGGGTACTGGCGCATCGGCCTGGCGGAGGATCAGCATCAGAAGGTGAAAAATACCGA
AGCCGCCGAGGATGAGGCGAAACTGGCGGGATAG

Upstream 100 bases:

>100_bases
TCGTGCCCCTGTTTGCGAAGACGATCCGCGACTAAGGCTCGCGTTCAATAATTTCATCGGCAGCCCAAAGGCGACCTATT
CCAATCGAAAGGACAGACCC

Downstream 100 bases:

>100_bases
TGCTGGGACGCGGGGTGGTGTGGGAGGAGTGCCCGACCCCGGCCGCAATCAGATTGGCACCGCGCAGACGCTCTAGCGTC
CGCCAAAATTGATCGAAAAG

Product: FAD-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPNDLTPPKPTPQKRISCVLTVSRAWRVTPNMIRVTLTGPEIADIPASIAGGHCKILLPAAGQSPADLTRAMAEGPKPTT
RTYTIRHARPEACEIDIDFVAHGDNGPASAWAARVQPGDILGFAGPGQPKLTDMTADYYLIAADMSALPVALAGLEALPK
DAKGIAIFEVQSAEDRQHINAPAGIAQHWLIHAHPEEQSAQQTDLIQRLTLPDGRIKTLVAGETGVIRALRLHLRGERAL
PRADVYASGYWRIGLAEDQHQKVKNTEAAEDEAKLAG

Sequences:

>Translated_277_residues
MPNDLTPPKPTPQKRISCVLTVSRAWRVTPNMIRVTLTGPEIADIPASIAGGHCKILLPAAGQSPADLTRAMAEGPKPTT
RTYTIRHARPEACEIDIDFVAHGDNGPASAWAARVQPGDILGFAGPGQPKLTDMTADYYLIAADMSALPVALAGLEALPK
DAKGIAIFEVQSAEDRQHINAPAGIAQHWLIHAHPEEQSAQQTDLIQRLTLPDGRIKTLVAGETGVIRALRLHLRGERAL
PRADVYASGYWRIGLAEDQHQKVKNTEAAEDEAKLAG
>Mature_276_residues
PNDLTPPKPTPQKRISCVLTVSRAWRVTPNMIRVTLTGPEIADIPASIAGGHCKILLPAAGQSPADLTRAMAEGPKPTTR
TYTIRHARPEACEIDIDFVAHGDNGPASAWAARVQPGDILGFAGPGQPKLTDMTADYYLIAADMSALPVALAGLEALPKD
AKGIAIFEVQSAEDRQHINAPAGIAQHWLIHAHPEEQSAQQTDLIQRLTLPDGRIKTLVAGETGVIRALRLHLRGERALP
RADVYASGYWRIGLAEDQHQKVKNTEAAEDEAKLAG

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=245, Percent_Identity=28.9795918367347, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 29760; Mature: 29629

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDLTPPKPTPQKRISCVLTVSRAWRVTPNMIRVTLTGPEIADIPASIAGGHCKILLPA
CCCCCCCCCCCHHHHEEEEEEECCCEECCCCEEEEEECCCCHHCCCHHHCCCEEEEEEEC
AGQSPADLTRAMAEGPKPTTRTYTIRHARPEACEIDIDFVAHGDNGPASAWAARVQPGDI
CCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCHHHEEEECCCCCE
LGFAGPGQPKLTDMTADYYLIAADMSALPVALAGLEALPKDAKGIAIFEVQSAEDRQHIN
EEECCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCC
APAGIAQHWLIHAHPEEQSAQQTDLIQRLTLPDGRIKTLVAGETGVIRALRLHLRGERAL
CCCCHHHHEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCC
PRADVYASGYWRIGLAEDQHQKVKNTEAAEDEAKLAG
CCCCEEECCEEEEECCCHHHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure 
PNDLTPPKPTPQKRISCVLTVSRAWRVTPNMIRVTLTGPEIADIPASIAGGHCKILLPA
CCCCCCCCCCHHHHEEEEEEECCCEECCCCEEEEEECCCCHHCCCHHHCCCEEEEEEEC
AGQSPADLTRAMAEGPKPTTRTYTIRHARPEACEIDIDFVAHGDNGPASAWAARVQPGDI
CCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCHHHEEEECCCCCE
LGFAGPGQPKLTDMTADYYLIAADMSALPVALAGLEALPKDAKGIAIFEVQSAEDRQHIN
EEECCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCC
APAGIAQHWLIHAHPEEQSAQQTDLIQRLTLPDGRIKTLVAGETGVIRALRLHLRGERAL
CCCCHHHHEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCC
PRADVYASGYWRIGLAEDQHQKVKNTEAAEDEAKLAG
CCCCEEECCEEEEECCCHHHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]