| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is cutM [H]
Identifier: 89054257
GI number: 89054257
Start: 1755417
End: 1756265
Strand: Direct
Name: cutM [H]
Synonym: Jann_1766
Alternate gene names: 89054257
Gene position: 1755417-1756265 (Clockwise)
Preceding gene: 89054256
Following gene: 89054260
Centisome position: 40.65
GC content: 64.43
Gene sequence:
>849_bases ATGTCGGGATTGAGTTGTATTTGCCAAGATGAAGGAGCGCATGGCGCCCTGAGAGGAGACGGAATGTATAATTTCGAATT AGTGAAACCCGGCAGCATCGCCGATGCGGTTACAGCGCTCGGGCAGGAGGAGGCCCAAGCGCTGGGTGGGGGGCAGACCC TGCTCCCCACCATGAAACAGCGGCTGTCGCAGGCCGATACGCTGGTCAGCCTGAATGGAATTGCCGAGATGGTCGGTATT TGTTCAGGCCATGGTGGGCAATTGTGCATTGGCGGGGCCACGACCCACGGCGCAGTCGCGGCTGATGGCAGCTATCCGGG CCTCGCGTCCCTTGCGGCGCGGATCGGAGACCCGGCGGTGCGCAATCGCGGCACGATTGGCGGATCGCTCGCCAACAATG ACCCGTCCGCCTGCTATCCGGCGGCGGCTTTGGCGTCGCGCGCGACCATCGTGACCAATGCCCGCGAGATTGCAGCGGAT GACTACTTTCAGGGCATGTTCGAGACGGCGCTGGAGGAGGGGGAGATCATCACCGAAGTGCGCTTCCCGATCCCCGAAGC GTCCAACTACCAGAAATTTGTGCAGCCCGCCTCGCGGTTTGCGCTGGTCGGTGTGTTCGTGGCCAAATTTGCCGACGGGG TGCGTGTCGCGGTGACGGGGGCGTCCAGCGAAGGCGTTTTCCGGTGGGCCGAGGCGGAAGCGGCGTTGAGCGCTGATTTC TCCAAGGCGGCTGTGGAGGGGCTGGCGGTGCCCGGTGACGACATGATCGCCGACCTGCATGGCACGGCCGAATACCGCGC GCATCTGGCCAAGGTCCTCACGGGCCGCGCGGTCGCGGCTGCGGCGTAA
Upstream 100 bases:
>100_bases CCACACGAGCGTCACCCATATTGATATGCCGCTGACGCCGTCGCGCGTCTGGTCGGCGATGCAAGGCTGAGAAAACAACC GGCGTCTGCGCGGGGCGTGG
Downstream 100 bases:
>100_bases TGTGATCCGGCGACGCGCCCAAGGGTTGTGCGCGTCGCTGGTAACGGCCGCGGAGCAGCTGCGCGCTAACTTCGGTGCAT CGCTTCGCCAACCTCGCGCA
Product: molybdopterin dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSGLSCICQDEGAHGALRGDGMYNFELVKPGSIADAVTALGQEEAQALGGGQTLLPTMKQRLSQADTLVSLNGIAEMVGI CSGHGGQLCIGGATTHGAVAADGSYPGLASLAARIGDPAVRNRGTIGGSLANNDPSACYPAAALASRATIVTNAREIAAD DYFQGMFETALEEGEIITEVRFPIPEASNYQKFVQPASRFALVGVFVAKFADGVRVAVTGASSEGVFRWAEAEAALSADF SKAAVEGLAVPGDDMIADLHGTAEYRAHLAKVLTGRAVAAAA
Sequences:
>Translated_282_residues MSGLSCICQDEGAHGALRGDGMYNFELVKPGSIADAVTALGQEEAQALGGGQTLLPTMKQRLSQADTLVSLNGIAEMVGI CSGHGGQLCIGGATTHGAVAADGSYPGLASLAARIGDPAVRNRGTIGGSLANNDPSACYPAAALASRATIVTNAREIAAD DYFQGMFETALEEGEIITEVRFPIPEASNYQKFVQPASRFALVGVFVAKFADGVRVAVTGASSEGVFRWAEAEAALSADF SKAAVEGLAVPGDDMIADLHGTAEYRAHLAKVLTGRAVAAAA >Mature_281_residues SGLSCICQDEGAHGALRGDGMYNFELVKPGSIADAVTALGQEEAQALGGGQTLLPTMKQRLSQADTLVSLNGIAEMVGIC SGHGGQLCIGGATTHGAVAADGSYPGLASLAARIGDPAVRNRGTIGGSLANNDPSACYPAAALASRATIVTNAREIAADD YFQGMFETALEEGEIITEVRFPIPEASNYQKFVQPASRFALVGVFVAKFADGVRVAVTGASSEGVFRWAEAEAALSADFS KAAVEGLAVPGDDMIADLHGTAEYRAHLAKVLTGRAVAAAA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=287, Percent_Identity=22.9965156794425, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 28776; Mature: 28644
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLSCICQDEGAHGALRGDGMYNFELVKPGSIADAVTALGQEEAQALGGGQTLLPTMKQ CCCCCEEEECCCCCCEEECCCEEEEEEECCCCHHHHHHHHCHHHHHHHCCCCHHHHHHHH RLSQADTLVSLNGIAEMVGICSGHGGQLCIGGATTHGAVAADGSYPGLASLAARIGDPAV HHHHHHHEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHCCHHH RNRGTIGGSLANNDPSACYPAAALASRATIVTNAREIAADDYFQGMFETALEEGEIITEV HCCCCCCCCCCCCCCCHHHHHHHHHHCHHEEECHHHHHHHHHHHHHHHHHHHCCCEEEEE RFPIPEASNYQKFVQPASRFALVGVFVAKFADGVRVAVTGASSEGVFRWAEAEAALSADF ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEHHHHHHHHCCH SKAAVEGLAVPGDDMIADLHGTAEYRAHLAKVLTGRAVAAAA HHHHHHCCCCCCCHHEECCCCHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure SGLSCICQDEGAHGALRGDGMYNFELVKPGSIADAVTALGQEEAQALGGGQTLLPTMKQ CCCCEEEECCCCCCEEECCCEEEEEEECCCCHHHHHHHHCHHHHHHHCCCCHHHHHHHH RLSQADTLVSLNGIAEMVGICSGHGGQLCIGGATTHGAVAADGSYPGLASLAARIGDPAV HHHHHHHEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHCCHHH RNRGTIGGSLANNDPSACYPAAALASRATIVTNAREIAADDYFQGMFETALEEGEIITEV HCCCCCCCCCCCCCCCHHHHHHHHHHCHHEEECHHHHHHHHHHHHHHHHHHHCCCEEEEE RFPIPEASNYQKFVQPASRFALVGVFVAKFADGVRVAVTGASSEGVFRWAEAEAALSADF ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEHHHHHHHHCCH SKAAVEGLAVPGDDMIADLHGTAEYRAHLAKVLTGRAVAAAA HHHHHHCCCCCCCHHEECCCCHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]