| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054199
Identifier: 89054199
GI number: 89054199
Start: 1690670
End: 1691125
Strand: Direct
Name: 89054199
Synonym: Jann_1708
Alternate gene names: NA
Gene position: 1690670-1691125 (Clockwise)
Preceding gene: 89054196
Following gene: 89054201
Centisome position: 39.15
GC content: 64.69
Gene sequence:
>456_bases ATGCGTTTCATGATTTTTCTGGCCGGGGCCGCAATGGCCGCGAGCTACTTCGTCACCTGGGTGGAACCGCCCTTCGCGGG GCAGGAGATCTCGCCCTCGGTCCTGATCGGCACCGATTTGCAGGCGATTATCACCGACGGGACCTGGCAGGCGCGGGTCT TTGTGGGGGGCTTTGTCCTGGCGGCGCTCTGCGCGTTGCTGGGGGCGCTGGGGCGCACGGCGGGGCTGGTCGCGCTTCTG GCCGGGGCATCGCCGGTGGTTCTTCTGGTCCATTACTACCTGCGGGCCGAGGATGTTCAGGCCGATCTGGGCCTGCCATT TTCGGTGAATTTTCAGGATCTTGGGCAGGTCTATGAGCTGCTTGGCGACTTCCTGCGCGCAGGTCTGTGGATGTATGCAG GCGGCGCGGCGGTTCTGCTGTTGGCGGGGATGAGTGTCACCTTCGGCAGGCGGTAG
Upstream 100 bases:
>100_bases TCACGAAACGATCATACGTTTGTCACGGGGGATTGGACCGGCGGGCGGTTTTGCGTTAATTTGACGCCCAACGATAAGCA AAAACGAGCGGAGCAGTCCT
Downstream 100 bases:
>100_bases GTGGGCCCGGCGCTCAGATCCACGATGGGGCCAGCGCCACAATGGCAACAACCACGGCGCAGACCGGCACCAGGGCGCGT CTGGACCGAGCCGCCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRFMIFLAGAAMAASYFVTWVEPPFAGQEISPSVLIGTDLQAIITDGTWQARVFVGGFVLAALCALLGALGRTAGLVALL AGASPVVLLVHYYLRAEDVQADLGLPFSVNFQDLGQVYELLGDFLRAGLWMYAGGAAVLLLAGMSVTFGRR
Sequences:
>Translated_151_residues MRFMIFLAGAAMAASYFVTWVEPPFAGQEISPSVLIGTDLQAIITDGTWQARVFVGGFVLAALCALLGALGRTAGLVALL AGASPVVLLVHYYLRAEDVQADLGLPFSVNFQDLGQVYELLGDFLRAGLWMYAGGAAVLLLAGMSVTFGRR >Mature_151_residues MRFMIFLAGAAMAASYFVTWVEPPFAGQEISPSVLIGTDLQAIITDGTWQARVFVGGFVLAALCALLGALGRTAGLVALL AGASPVVLLVHYYLRAEDVQADLGLPFSVNFQDLGQVYELLGDFLRAGLWMYAGGAAVLLLAGMSVTFGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15989; Mature: 15989
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFMIFLAGAAMAASYFVTWVEPPFAGQEISPSVLIGTDLQAIITDGTWQARVFVGGFVL CEEEEEEHHHHHHHHHHHEECCCCCCCCCCCCCEEECCCCEEEEECCCEEEHHHHHHHHH AALCALLGALGRTAGLVALLAGASPVVLLVHYYLRAEDVQADLGLPFSVNFQDLGQVYEL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCCCEEECHHHHHHHHHH LGDFLRAGLWMYAGGAAVLLLAGMSVTFGRR HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRFMIFLAGAAMAASYFVTWVEPPFAGQEISPSVLIGTDLQAIITDGTWQARVFVGGFVL CEEEEEEHHHHHHHHHHHEECCCCCCCCCCCCCEEECCCCEEEEECCCEEEHHHHHHHHH AALCALLGALGRTAGLVALLAGASPVVLLVHYYLRAEDVQADLGLPFSVNFQDLGQVYEL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCCCEEECHHHHHHHHHH LGDFLRAGLWMYAGGAAVLLLAGMSVTFGRR HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA