| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yedI [H]
Identifier: 89054190
GI number: 89054190
Start: 1681373
End: 1682341
Strand: Direct
Name: yedI [H]
Synonym: Jann_1699
Alternate gene names: 89054190
Gene position: 1681373-1682341 (Clockwise)
Preceding gene: 89054188
Following gene: 89054192
Centisome position: 38.94
GC content: 62.85
Gene sequence:
>969_bases ATGAGCGGACTTCTGGCCCTGTTGGACGATGTGGCGGCGATTGCAAAGGTGGCGGCCGCCTCCGTCGATGACGTGATCGG ACAGGCGGCGAAGGCCGGTGCAAAGGCGGCAGGTGCTGTGATCGACGACGCCGCCGTGACGCCCAAATATGTCCACGGGT TTGAGGCCAAGCGCGAACTTCCCATCGTCTGGAAGATCGCCCGCGCCTCCATCTTCAACAAGCTGGTGATCCTGCTGCCC ATTGCCCTTTTGCTGAGCACATTCGCCCCCTGGATGATTCCGCCGCTCCTGATGTTGGGCGGGGCGTATTTGTGTTTTGA GGGCGCGGAGAAGATCCACCATTGGCTGAAGCCGCACCACGATGAAGTGGAGGAACTGGCCAAGAAGAAGATGTCCGCCG AGGACACCGCGCATCTGGAAGAGCAGAAGGTCAAAGGCGCGATCAAGACCGACTTCATCCTGTCGGCTGAGATCATGACC ATCGCGCTGGCGGCCCTGGAAACCGACAATATCTGGTTCCGGGGCGCGGCGCTGGCCGTTGTGGCCGTGGGCATCACGGT GCTTGTCTACGGCGCGGTCGCGCTGATCGTGAAGGCCGATGATGTGGGGCTGCATATGGCCTCCAACGGGCGTCTCGACA CCACCCAGAAAGTCGGCGAGCTGATCGTGCGCGGGATGCCGACGTTCCTGAAATGGCTGACGATTGTGGGCACGGCGGCG ATGCTCTGGGTCGGCGGCTCGATCATCGTCCACGGGTTGGCCGAGATGGGCTGGCACGGGCCCGAGGATTGGATTGACGG CGTCGCCCACGCCGTTGGCGGCGAGAGCGGCCTGATCGTCTGGCTGGTGAAAGCGGCCATTGACGGTGTGCTCGGAATTG TCGTGGGCATGCTGATCATCCCGGTCGTGACCTATATCCTCGTGCCCGCCATGCGCGCGATGGGGCTTGGCGGTAACGCG GCGCATTAA
Upstream 100 bases:
>100_bases ACCGGCAGTGGGTGGACGTCGTTGGTCTTTGACATATTGTGCGCCCAACGCGCATCTTTGACGAGAAATGTGCGACACGC GCGGATGGTGAGGTGATGAG
Downstream 100 bases:
>100_bases GATCGGGCGGGCCAGCGCCGGAGGTCCCCGGGGGGCTGCGGATCGCTTGCCATACCCCTGCACAGGTATACATGCCCTTG AAAACATGGGCATTAACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSGLLALLDDVAAIAKVAAASVDDVIGQAAKAGAKAAGAVIDDAAVTPKYVHGFEAKRELPIVWKIARASIFNKLVILLP IALLLSTFAPWMIPPLLMLGGAYLCFEGAEKIHHWLKPHHDEVEELAKKKMSAEDTAHLEEQKVKGAIKTDFILSAEIMT IALAALETDNIWFRGAALAVVAVGITVLVYGAVALIVKADDVGLHMASNGRLDTTQKVGELIVRGMPTFLKWLTIVGTAA MLWVGGSIIVHGLAEMGWHGPEDWIDGVAHAVGGESGLIVWLVKAAIDGVLGIVVGMLIIPVVTYILVPAMRAMGLGGNA AH
Sequences:
>Translated_322_residues MSGLLALLDDVAAIAKVAAASVDDVIGQAAKAGAKAAGAVIDDAAVTPKYVHGFEAKRELPIVWKIARASIFNKLVILLP IALLLSTFAPWMIPPLLMLGGAYLCFEGAEKIHHWLKPHHDEVEELAKKKMSAEDTAHLEEQKVKGAIKTDFILSAEIMT IALAALETDNIWFRGAALAVVAVGITVLVYGAVALIVKADDVGLHMASNGRLDTTQKVGELIVRGMPTFLKWLTIVGTAA MLWVGGSIIVHGLAEMGWHGPEDWIDGVAHAVGGESGLIVWLVKAAIDGVLGIVVGMLIIPVVTYILVPAMRAMGLGGNA AH >Mature_321_residues SGLLALLDDVAAIAKVAAASVDDVIGQAAKAGAKAAGAVIDDAAVTPKYVHGFEAKRELPIVWKIARASIFNKLVILLPI ALLLSTFAPWMIPPLLMLGGAYLCFEGAEKIHHWLKPHHDEVEELAKKKMSAEDTAHLEEQKVKGAIKTDFILSAEIMTI ALAALETDNIWFRGAALAVVAVGITVLVYGAVALIVKADDVGLHMASNGRLDTTQKVGELIVRGMPTFLKWLTIVGTAAM LWVGGSIIVHGLAEMGWHGPEDWIDGVAHAVGGESGLIVWLVKAAIDGVLGIVVGMLIIPVVTYILVPAMRAMGLGGNAA H
Specific function: Unknown
COG id: COG2354
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788268, Length=303, Percent_Identity=39.2739273927393, Blast_Score=196, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008526 [H]
Pfam domain/function: PF05661 DUF808 [H]
EC number: NA
Molecular weight: Translated: 33956; Mature: 33824
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLLALLDDVAAIAKVAAASVDDVIGQAAKAGAKAAGAVIDDAAVTPKYVHGFEAKREL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHCCCCCCHHHHHCCCCCCCC PIVWKIARASIFNKLVILLPIALLLSTFAPWMIPPLLMLGGAYLCFEGAEKIHHWLKPHH CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH DEVEELAKKKMSAEDTAHLEEQKVKGAIKTDFILSAEIMTIALAALETDNIWFRGAALAV HHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH VAVGITVLVYGAVALIVKADDVGLHMASNGRLDTTQKVGELIVRGMPTFLKWLTIVGTAA HHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH MLWVGGSIIVHGLAEMGWHGPEDWIDGVAHAVGGESGLIVWLVKAAIDGVLGIVVGMLII HHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH PVVTYILVPAMRAMGLGGNAAH HHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SGLLALLDDVAAIAKVAAASVDDVIGQAAKAGAKAAGAVIDDAAVTPKYVHGFEAKREL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHCCCCCCHHHHHCCCCCCCC PIVWKIARASIFNKLVILLPIALLLSTFAPWMIPPLLMLGGAYLCFEGAEKIHHWLKPHH CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH DEVEELAKKKMSAEDTAHLEEQKVKGAIKTDFILSAEIMTIALAALETDNIWFRGAALAV HHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH VAVGITVLVYGAVALIVKADDVGLHMASNGRLDTTQKVGELIVRGMPTFLKWLTIVGTAA HHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH MLWVGGSIIVHGLAEMGWHGPEDWIDGVAHAVGGESGLIVWLVKAAIDGVLGIVVGMLII HHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH PVVTYILVPAMRAMGLGGNAAH HHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2527357; 7567469 [H]