The gene/protein map for NC_007802 is currently unavailable.
Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89054173

Identifier: 89054173

GI number: 89054173

Start: 1665432

End: 1665914

Strand: Reverse

Name: 89054173

Synonym: Jann_1682

Alternate gene names: NA

Gene position: 1665914-1665432 (Counterclockwise)

Preceding gene: 89054178

Following gene: 89054168

Centisome position: 38.58

GC content: 64.18

Gene sequence:

>483_bases
ATGACCAAACGCACCCCCGCCGTGCGACCGTTCTACCCCGTCGTGATCGCGGCTGCGACCGTGATTTTCGTCCAGCCTGT
CCTGGCCCAGATGTCGCTGGACCCGGCCTGCATCTACCAGGAAGGCTCGCAGGCCTCCTGCACCCACGCGGTGGCCTGCA
TCGGCGGCGACACGTTGTTTGTGGGCGGCACTGTCGGCTGGGATGAGGGCGTCCTGACCGGCGATCTGTCGAATGGAGCC
AGCTGCACCGGCATTTGGAACAACGCCAATCAGCTGGTCAACTTCACCTGCGACGACGGCCAGACAGGCATCGTGCGCTA
CACTCTGTTTGACGGATCGACCGGCACGGCCATCGGCGCGGGCGAGACGATTGCAGGTCGCCCGATCGAGGCGTGGTCAG
GGCAGAACATCGTGGATTTCGTGGAGCGTGAGACGGGCCGCGTCACCCTGCAATGCGGTGTGGAAGAATTGCTGCTGGGT
TAG

Upstream 100 bases:

>100_bases
GATGCCCTTTGCCGAATGCCATGATGAGACTCCCCTTCGCCCGACCGCTTCGTTCCTTAAGGGCAAACTCACCCGCCCTA
TCGCTGCGCTACGTGAGGGC

Downstream 100 bases:

>100_bases
CCCGACAGGCCCGCGCGCCACAGCGACAGGCGCACAGCGTAAGGCGTGGGGGTCCAGGTGCCCATTGGCACGCCGGAGGC
CCGCAAGACCCGCCCCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTKRTPAVRPFYPVVIAAATVIFVQPVLAQMSLDPACIYQEGSQASCTHAVACIGGDTLFVGGTVGWDEGVLTGDLSNGA
SCTGIWNNANQLVNFTCDDGQTGIVRYTLFDGSTGTAIGAGETIAGRPIEAWSGQNIVDFVERETGRVTLQCGVEELLLG

Sequences:

>Translated_160_residues
MTKRTPAVRPFYPVVIAAATVIFVQPVLAQMSLDPACIYQEGSQASCTHAVACIGGDTLFVGGTVGWDEGVLTGDLSNGA
SCTGIWNNANQLVNFTCDDGQTGIVRYTLFDGSTGTAIGAGETIAGRPIEAWSGQNIVDFVERETGRVTLQCGVEELLLG
>Mature_159_residues
TKRTPAVRPFYPVVIAAATVIFVQPVLAQMSLDPACIYQEGSQASCTHAVACIGGDTLFVGGTVGWDEGVLTGDLSNGAS
CTGIWNNANQLVNFTCDDGQTGIVRYTLFDGSTGTAIGAGETIAGRPIEAWSGQNIVDFVERETGRVTLQCGVEELLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16733; Mature: 16602

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRTPAVRPFYPVVIAAATVIFVQPVLAQMSLDPACIYQEGSQASCTHAVACIGGDTLF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCEEE
VGGTVGWDEGVLTGDLSNGASCTGIWNNANQLVNFTCDDGQTGIVRYTLFDGSTGTAIGA
ECCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCCCEECC
GETIAGRPIEAWSGQNIVDFVERETGRVTLQCGVEELLLG
CCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECHHHHHCC
>Mature Secondary Structure 
TKRTPAVRPFYPVVIAAATVIFVQPVLAQMSLDPACIYQEGSQASCTHAVACIGGDTLF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCEEE
VGGTVGWDEGVLTGDLSNGASCTGIWNNANQLVNFTCDDGQTGIVRYTLFDGSTGTAIGA
ECCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCCCEECC
GETIAGRPIEAWSGQNIVDFVERETGRVTLQCGVEELLLG
CCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA