| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054140
Identifier: 89054140
GI number: 89054140
Start: 1634477
End: 1635166
Strand: Reverse
Name: 89054140
Synonym: Jann_1649
Alternate gene names: NA
Gene position: 1635166-1634477 (Counterclockwise)
Preceding gene: 89054141
Following gene: 89054119
Centisome position: 37.87
GC content: 60.0
Gene sequence:
>690_bases ATGATTGCCCCATATACGACCCTGAAAGACGTCACGTTGTCCACCGAGGCAGGCACATTCGACATCACAGATGTGATGTT CGATCCCGAGCGGCTGTCGGTTGAATATGCCGTATTGGAAGGCGGAGGCTGGGTGACCAATACCGACGTTCTGGTTCACG CCAAGCGCCTGAAGCAGTTTGAGGTCGACGCCATGACCTGGCACGCCAATATGGGCGAAACCGAGCTGGCGCGCGCGCCC CGACTGGGCAAAGATAACGTGGTCGGGTTGAGCGATCTGCCCCCCGTCATTGTGGGCCCTTTCGGCATGACCTACTCGCC CATCCTGATGGCAGCGCAGCTGTTCGGCTATCCGGTCAGCAAAAGCGCGACCGCCAAGGATGCAGAAGATCGGCTGGAAC GGATGAGCGAATGGATGGGGGCCGTCGTGTTCAGCTCCGAAGGTCCCATCGCGCGGATTGTGAACCTCTATATTGATACG GAAACGATGCGTGTCGTGGAGGTGAAGCTGGCCTTAGGCACGGACATGCACGTTCTGCCAATCAGCGCGATCCGCTCCTT CGTGCGTCGCGATGGATACGCCGTCTGCGACCTGACGGAGGCTGAAATCAAACAGGGCCTGACCGCAGCCGAACCGGGGC CAAGCCTGCCAACGATGACCGACAAACGGTGGGTCCAGACGGCGGCCTGA
Upstream 100 bases:
>100_bases GCGCCACCTCGATCCGCACGAGCGCAAGCGCGCCTCCCGCGCGGGGGCCTGACGGGAACAATCGGGCCATTTCCGCGTTG TTTGCGCAAGGAGGTGGCCC
Downstream 100 bases:
>100_bases AACTGTGTCGCACGGCGCCGGATCAGCCCGCGACAGCAGGCCCGCCAAACAGGTGATCCATCGTCAGTGACGGTTGCGCG CAGCCTGCCTCGCCCACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MIAPYTTLKDVTLSTEAGTFDITDVMFDPERLSVEYAVLEGGGWVTNTDVLVHAKRLKQFEVDAMTWHANMGETELARAP RLGKDNVVGLSDLPPVIVGPFGMTYSPILMAAQLFGYPVSKSATAKDAEDRLERMSEWMGAVVFSSEGPIARIVNLYIDT ETMRVVEVKLALGTDMHVLPISAIRSFVRRDGYAVCDLTEAEIKQGLTAAEPGPSLPTMTDKRWVQTAA
Sequences:
>Translated_229_residues MIAPYTTLKDVTLSTEAGTFDITDVMFDPERLSVEYAVLEGGGWVTNTDVLVHAKRLKQFEVDAMTWHANMGETELARAP RLGKDNVVGLSDLPPVIVGPFGMTYSPILMAAQLFGYPVSKSATAKDAEDRLERMSEWMGAVVFSSEGPIARIVNLYIDT ETMRVVEVKLALGTDMHVLPISAIRSFVRRDGYAVCDLTEAEIKQGLTAAEPGPSLPTMTDKRWVQTAA >Mature_229_residues MIAPYTTLKDVTLSTEAGTFDITDVMFDPERLSVEYAVLEGGGWVTNTDVLVHAKRLKQFEVDAMTWHANMGETELARAP RLGKDNVVGLSDLPPVIVGPFGMTYSPILMAAQLFGYPVSKSATAKDAEDRLERMSEWMGAVVFSSEGPIARIVNLYIDT ETMRVVEVKLALGTDMHVLPISAIRSFVRRDGYAVCDLTEAEIKQGLTAAEPGPSLPTMTDKRWVQTAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25071; Mature: 25071
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPYTTLKDVTLSTEAGTFDITDVMFDPERLSVEYAVLEGGGWVTNTDVLVHAKRLKQF CCCCCCCCCCEEEECCCCCEEEHHEEECHHHHEEEEEEEECCCEEECCHHEEEHHHHHHE EVDAMTWHANMGETELARAPRLGKDNVVGLSDLPPVIVGPFGMTYSPILMAAQLFGYPVS ECEEEEEECCCCCHHHHHCCCCCCCCEECCCCCCCEEECCCCCCHHHHHHHHHHHCCCCC KSATAKDAEDRLERMSEWMGAVVFSSEGPIARIVNLYIDTETMRVVEVKLALGTDMHVLP CCCCCCCHHHHHHHHHHHHCEEEECCCCCCEEEEEEEECCCEEEEEEEEEECCCCCEEEE ISAIRSFVRRDGYAVCDLTEAEIKQGLTAAEPGPSLPTMTDKRWVQTAA HHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MIAPYTTLKDVTLSTEAGTFDITDVMFDPERLSVEYAVLEGGGWVTNTDVLVHAKRLKQF CCCCCCCCCCEEEECCCCCEEEHHEEECHHHHEEEEEEEECCCEEECCHHEEEHHHHHHE EVDAMTWHANMGETELARAPRLGKDNVVGLSDLPPVIVGPFGMTYSPILMAAQLFGYPVS ECEEEEEECCCCCHHHHHCCCCCCCCEECCCCCCCEEECCCCCCHHHHHHHHHHHCCCCC KSATAKDAEDRLERMSEWMGAVVFSSEGPIARIVNLYIDTETMRVVEVKLALGTDMHVLP CCCCCCCHHHHHHHHHHHHCEEEECCCCCCEEEEEEEECCCEEEEEEEEEECCCCCEEEE ISAIRSFVRRDGYAVCDLTEAEIKQGLTAAEPGPSLPTMTDKRWVQTAA HHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA