Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054138

Identifier: 89054138

GI number: 89054138

Start: 1632826

End: 1633533

Strand: Direct

Name: 89054138

Synonym: Jann_1647

Alternate gene names: NA

Gene position: 1632826-1633533 (Clockwise)

Preceding gene: 89054137

Following gene: 89054139

Centisome position: 37.81

GC content: 63.42

Gene sequence:

>708_bases
ATGACTGACACCCCCGAACTGGGTCTTCCCCTTTTGGCGCCTGCACAGGCCCAAAAGCATGTGACTGTGAACGAGGCGCT
GGTGCGTCTGGACGGCCTCGCACAATTGCGCCTGCAATCGGTGACGGAAACGACACCACCCGCCGCCCTTGATGGCTTTG
CATATGGTGTGCCCACGGGCGCGGTCGATGCCTGGGCCGGGCAGGAGGGCTCCATTGCCATCGCGTCTGGCGGCGGTTGG
GATTTCGTATCGGCGCAACGGGGGTGGCGGGCCATCGTGCTAGATGCCGGATCGTTGGCGATTTTTGATGGGACCGGATG
GCGTGTTGGGGCGCAGACCCTGACGCCTGGCGGCGCGTCGGTTGGATTGACGAGCACCGAGGTGGACGTGGCGCTGACAG
CTGGCACCAGCGTGACAACGGCTGATCTTTTTCCTGAACGTTCAATCGCTTATGGGATCACTGGGCGGGTCGTGTCGGCG
ATCACCGGCACCGTGACCACGTGGGATATCGGCGTCGCAGGCGACCTGCAACGCTATGGCTCAGGCCTTGGTACGTCGCT
CAATTCTTGGGTCAGCGGCCCAGGTGTGCCCCAAGTTTATTGGTCGCCCACGGCCCTTGAAATCACGGCCCAGGGCGGCG
ATTTCGCGGGCGGCACCATCCGGTTGGTTGCGCATTACGCGACCCTCTCCTTGCCGGATCCTGTCTAG

Upstream 100 bases:

>100_bases
GCGATGCGCGCCAGCGATGGCACGCTGAGCGACTATTTCATCGAGGTTGCTCAAGTCTCCGAACGGTTCGGAGCGGGGCC
ATTTGCAAGGATTCAGATCA

Downstream 100 bases:

>100_bases
GAAACTGTCAGCTCAGCTAACAGTCTACACGTATTCGTTGCATGGACCTTTGCGGTGCGCTCGCTTATTCTGGCGAGACC
AGCACCGCAAAGGAGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTDTPELGLPLLAPAQAQKHVTVNEALVRLDGLAQLRLQSVTETTPPAALDGFAYGVPTGAVDAWAGQEGSIAIASGGGW
DFVSAQRGWRAIVLDAGSLAIFDGTGWRVGAQTLTPGGASVGLTSTEVDVALTAGTSVTTADLFPERSIAYGITGRVVSA
ITGTVTTWDIGVAGDLQRYGSGLGTSLNSWVSGPGVPQVYWSPTALEITAQGGDFAGGTIRLVAHYATLSLPDPV

Sequences:

>Translated_235_residues
MTDTPELGLPLLAPAQAQKHVTVNEALVRLDGLAQLRLQSVTETTPPAALDGFAYGVPTGAVDAWAGQEGSIAIASGGGW
DFVSAQRGWRAIVLDAGSLAIFDGTGWRVGAQTLTPGGASVGLTSTEVDVALTAGTSVTTADLFPERSIAYGITGRVVSA
ITGTVTTWDIGVAGDLQRYGSGLGTSLNSWVSGPGVPQVYWSPTALEITAQGGDFAGGTIRLVAHYATLSLPDPV
>Mature_234_residues
TDTPELGLPLLAPAQAQKHVTVNEALVRLDGLAQLRLQSVTETTPPAALDGFAYGVPTGAVDAWAGQEGSIAIASGGGWD
FVSAQRGWRAIVLDAGSLAIFDGTGWRVGAQTLTPGGASVGLTSTEVDVALTAGTSVTTADLFPERSIAYGITGRVVSAI
TGTVTTWDIGVAGDLQRYGSGLGTSLNSWVSGPGVPQVYWSPTALEITAQGGDFAGGTIRLVAHYATLSLPDPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23937; Mature: 23806

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTPELGLPLLAPAQAQKHVTVNEALVRLDGLAQLRLQSVTETTPPAALDGFAYGVPTG
CCCCCCCCCCEECCCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCCCCHHCCEEECCCCC
AVDAWAGQEGSIAIASGGGWDFVSAQRGWRAIVLDAGSLAIFDGTGWRVGAQTLTPGGAS
CCCCCCCCCCCEEEECCCCCCEEECCCCCEEEEEECCCEEEECCCCCEECCEEECCCCCE
VGLTSTEVDVALTAGTSVTTADLFPERSIAYGITGRVVSAITGTVTTWDIGVAGDLQRYG
ECEECCCEEEEEECCCCEEEHHCCCCCCEEECCHHHHHHHHCCCEEEEECCCCCCHHHHC
SGLGTSLNSWVSGPGVPQVYWSPTALEITAQGGDFAGGTIRLVAHYATLSLPDPV
CCCCCCHHHHCCCCCCCEEEECCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCC
>Mature Secondary Structure 
TDTPELGLPLLAPAQAQKHVTVNEALVRLDGLAQLRLQSVTETTPPAALDGFAYGVPTG
CCCCCCCCCEECCCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCCCCHHCCEEECCCCC
AVDAWAGQEGSIAIASGGGWDFVSAQRGWRAIVLDAGSLAIFDGTGWRVGAQTLTPGGAS
CCCCCCCCCCCEEEECCCCCCEEECCCCCEEEEEECCCEEEECCCCCEECCEEECCCCCE
VGLTSTEVDVALTAGTSVTTADLFPERSIAYGITGRVVSAITGTVTTWDIGVAGDLQRYG
ECEECCCEEEEEECCCCEEEHHCCCCCCEEECCHHHHHHHHCCCEEEEECCCCCCHHHHC
SGLGTSLNSWVSGPGVPQVYWSPTALEITAQGGDFAGGTIRLVAHYATLSLPDPV
CCCCCCHHHHCCCCCCCEEEECCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA