| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054131
Identifier: 89054131
GI number: 89054131
Start: 1625239
End: 1625556
Strand: Direct
Name: 89054131
Synonym: Jann_1640
Alternate gene names: NA
Gene position: 1625239-1625556 (Clockwise)
Preceding gene: 89054130
Following gene: 89054132
Centisome position: 37.64
GC content: 66.98
Gene sequence:
>318_bases ATGGCCAATCCCTGGACGGGCGAAGTGGCGTTGACCCTGAACGGGGAGCGGCACACGGCGAAGCTGACGCTGGGTGCGTT GGCAGAGCTGGAAGACTGGCTTGGCGTGGGGTCGCTCACCGAAATGGTCGCCCGTTTCGAGGGGGACGGCCTGAAATCCG CGGATGTGCTGGCGCTGGTCTGCGCCGGGCTTCGCGGCGGTGGGTGGCGTGGCCGGATGGAAGACCTGATGGAGGCCGAG ATTGAGGGCGGAATCCTGGAGGCCGCGCGGGTGGCTGCACGTCTTCTGGTTCTGGCGTTCCGACCGGTATCCGCATGA
Upstream 100 bases:
>100_bases AGATCAGCTCTATCGAATATGCGGGTACGCACGATGGGGAGGCGACCTACGAGATTTCCATGGCGTCGGCTGGTGCCCTG ACGTTCACGACGATCTGACC
Downstream 100 bases:
>100_bases ATGACGCTGCACCGGGCTTTGATTGGCCTGCGCTCATGCGCGTGGCTTATCAGGGGCTTGGCCTGTCGCCCGAGGCCTTT TGGGCGATGACCCCGTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MANPWTGEVALTLNGERHTAKLTLGALAELEDWLGVGSLTEMVARFEGDGLKSADVLALVCAGLRGGGWRGRMEDLMEAE IEGGILEAARVAARLLVLAFRPVSA
Sequences:
>Translated_105_residues MANPWTGEVALTLNGERHTAKLTLGALAELEDWLGVGSLTEMVARFEGDGLKSADVLALVCAGLRGGGWRGRMEDLMEAE IEGGILEAARVAARLLVLAFRPVSA >Mature_104_residues ANPWTGEVALTLNGERHTAKLTLGALAELEDWLGVGSLTEMVARFEGDGLKSADVLALVCAGLRGGGWRGRMEDLMEAEI EGGILEAARVAARLLVLAFRPVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11091; Mature: 10960
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPWTGEVALTLNGERHTAKLTLGALAELEDWLGVGSLTEMVARFEGDGLKSADVLALV CCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHH CAGLRGGGWRGRMEDLMEAEIEGGILEAARVAARLLVLAFRPVSA HHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ANPWTGEVALTLNGERHTAKLTLGALAELEDWLGVGSLTEMVARFEGDGLKSADVLALV CCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHH CAGLRGGGWRGRMEDLMEAEIEGGILEAARVAARLLVLAFRPVSA HHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA