| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054129
Identifier: 89054129
GI number: 89054129
Start: 1624371
End: 1624781
Strand: Direct
Name: 89054129
Synonym: Jann_1638
Alternate gene names: NA
Gene position: 1624371-1624781 (Clockwise)
Preceding gene: 89054128
Following gene: 89054130
Centisome position: 37.62
GC content: 64.23
Gene sequence:
>411_bases ATGAGCTACGCTGCCACAGCCGCCTTGCAGGAGGCCGTATACACGGCGCTGACGTCGGACGCCGCTGTCAGCACGTTGAC GGATGGTGCGATCTACGACGCGCTGCCGCCGGGCCCGGTCCCGTCCATCTACGTGAGCCTTGGGCCTGAGCGGGTCAAAG ATGCTTCAGACGTTGTGGGCGATGGGTCGGTGCATGATTTTCCGGTCACTGTCATCTCAGACACGGCCGGATTTCACACG GCCAAGACGATTGCCGCAGCGGTGTCCGATGCGCTCACGGGGTCTGCCATGACCCTGTCGCGTGGCACTCTCACAGGCCT TAACTTTCTGCGCGCCCGCGCCCGGCGGGTCGGGGACGGACGCGAAATCGAAGTCTGGTTTCGCGCCTTCATCGATTCCG GCGGCGCATGA
Upstream 100 bases:
>100_bases GGTTTCGGGATGTTGAGCGCCTCTACCGCATTGAGGCGGTGACCGAGGCCGAGGCGGCGGGCCGCTATCTGGTGTGCTTT GCGAAAGAGGAGGTGGGCGC
Downstream 100 bases:
>100_bases TCGCCACCCCTACACATCTTTGACAATACTGGAGATTTTCCATGACAGCACAGAACGGCAAGGACCTTCTTGTGAAGGTA GATATGGACGGCAATGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSYAATAALQEAVYTALTSDAAVSTLTDGAIYDALPPGPVPSIYVSLGPERVKDASDVVGDGSVHDFPVTVISDTAGFHT AKTIAAAVSDALTGSAMTLSRGTLTGLNFLRARARRVGDGREIEVWFRAFIDSGGA
Sequences:
>Translated_136_residues MSYAATAALQEAVYTALTSDAAVSTLTDGAIYDALPPGPVPSIYVSLGPERVKDASDVVGDGSVHDFPVTVISDTAGFHT AKTIAAAVSDALTGSAMTLSRGTLTGLNFLRARARRVGDGREIEVWFRAFIDSGGA >Mature_135_residues SYAATAALQEAVYTALTSDAAVSTLTDGAIYDALPPGPVPSIYVSLGPERVKDASDVVGDGSVHDFPVTVISDTAGFHTA KTIAAAVSDALTGSAMTLSRGTLTGLNFLRARARRVGDGREIEVWFRAFIDSGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14007; Mature: 13876
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYAATAALQEAVYTALTSDAAVSTLTDGAIYDALPPGPVPSIYVSLGPERVKDASDVVG CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHCC DGSVHDFPVTVISDTAGFHTAKTIAAAVSDALTGSAMTLSRGTLTGLNFLRARARRVGDG CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCC REIEVWFRAFIDSGGA CCHHHHHHHHHCCCCC >Mature Secondary Structure SYAATAALQEAVYTALTSDAAVSTLTDGAIYDALPPGPVPSIYVSLGPERVKDASDVVG CCHHHHHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHCC DGSVHDFPVTVISDTAGFHTAKTIAAAVSDALTGSAMTLSRGTLTGLNFLRARARRVGDG CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCC REIEVWFRAFIDSGGA CCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA