| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is acpP
Identifier: 89054118
GI number: 89054118
Start: 1613897
End: 1614130
Strand: Direct
Name: acpP
Synonym: Jann_1627
Alternate gene names: 89054118
Gene position: 1613897-1614130 (Clockwise)
Preceding gene: 89054117
Following gene: 89054120
Centisome position: 37.38
GC content: 56.41
Gene sequence:
>234_bases ATGAGCGACATCGCAGCGCGTGTGAAGAAGATCGTTGTTGAGCACCTGAACGTCGACGAGGACAAAGTGGTTGATAGCGC GTCGTTCATCGACGACCTCGGCGCAGATTCGCTCGACACGGTCGAGCTGGTCATGGCCTTCGAGGAAGAGTTCGGCATCG AGATCCCCGATGACGCCGCCGAGACGATCCAGACATTTGGCGATGCGACAAAGTTCATCTCGGAAGCTCAGTAA
Upstream 100 bases:
>100_bases TAGGGGGCCGGGCATTCTGAGCGGCCAGACCGGCATGACTGAAACTGGGGGCGCACTTTAGGGTGCAAACGCTCCCGACC AAGAGAATGAGGAACCTAAG
Downstream 100 bases:
>100_bases GCTTCAAGGCTGACGGATTTGACGGCGTTCGGAGAGATCCGGGCGCCGTTTTCTGTTGCGGGACGGGGAGACGCTGGTCC ACGATTTTGCCTGGCAAAAC
Product: acyl carrier protein
Products: NA
Alternate protein names: ACP
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MSDIAARVKKIVVEHLNVDEDKVVDSASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAAETIQTFGDATKFISEAQ
Sequences:
>Translated_77_residues MSDIAARVKKIVVEHLNVDEDKVVDSASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAAETIQTFGDATKFISEAQ >Mature_76_residues SDIAARVKKIVVEHLNVDEDKVVDSASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAAETIQTFGDATKFISEAQ
Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain
Homologues:
Organism=Escherichia coli, GI1787336, Length=77, Percent_Identity=58.4415584415584, Blast_Score=86, Evalue=5e-19, Organism=Drosophila melanogaster, GI17136932, Length=75, Percent_Identity=44, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACP_JANSC (Q28RW8)
Other databases:
- EMBL: CP000264 - RefSeq: YP_509569.1 - HSSP: Q5SL79 - ProteinModelPortal: Q28RW8 - SMR: Q28RW8 - STRING: Q28RW8 - GeneID: 3934075 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_1627 - eggNOG: COG0236 - HOGENOM: HBG755218 - OMA: DIIVSKM - PhylomeDB: Q28RW8 - ProtClustDB: PRK00982 - BioCyc: JSP290400:JANN_1627-MONOMER - GO: GO:0005737 - HAMAP: MF_01217 - InterPro: IPR003231 - InterPro: IPR009081 - InterPro: IPR006163 - InterPro: IPR006162 - Gene3D: G3DSA:1.10.1200.10 - TIGRFAMs: TIGR00517
Pfam domain/function: PF00550 PP-binding; SSF47336 ACP_like
EC number: NA
Molecular weight: Translated: 8406; Mature: 8275
Theoretical pI: Translated: 3.66; Mature: 3.66
Prosite motif: PS50075 ACP_DOMAIN; PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIAARVKKIVVEHLNVDEDKVVDSASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHH ETIQTFGDATKFISEAQ HHHHHHHHHHHHHHCCC >Mature Secondary Structure SDIAARVKKIVVEHLNVDEDKVVDSASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAA CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHH ETIQTFGDATKFISEAQ HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA