| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054114
Identifier: 89054114
GI number: 89054114
Start: 1610548
End: 1611426
Strand: Direct
Name: 89054114
Synonym: Jann_1623
Alternate gene names: NA
Gene position: 1610548-1611426 (Clockwise)
Preceding gene: 89054109
Following gene: 89054115
Centisome position: 37.3
GC content: 61.66
Gene sequence:
>879_bases GTGGCGTACCAGAAGTTTTTGAAGAATGAACATGGCGCCGCGACGGTCGATTGGGTTGTCGTGATGGCGGCGCTTGTTGG CCTGGGCGTGGCGGTGACGAACCAGACAGATGCCGCCCTGACCACGGAATCGCAGAACATTCAGGGTGAATTTCAAAACG GCATGTTCGAGACCGCATGGGACAGCTCATTGGCCGTCCAGCCGGATCAGGATGCCGGCACCACGTGCACGGGCGGCACG TCCTGCGATCCGGGCACGGGCAGTGGGGGCACCACCCTTTGGACCGGAACGACGACGGACCCCGATCCGGACCCCGATCC CGATCCCGACCCAACGCCGGATCCCGACCCCGATCCAACGCCGGATCCTGATCCCGATCCGACGACCGACCCGGATCCTG ATCCGGACCCCGATCCTGACCCCGATCCCACACCGGAACCGGCAAGCGCGCCTGCGGCAGGCTGCCCGTCGACCAACTAT TTCGGCGTGCCGATCGCATCGGACGGCTCGGACTTTGGCAACAACAACGATTACACGCTCCGCACCAGCGGCTACACTAA CCTGCGCTCCTGCTCAGGCTTGCCGAACAGACGCGGTTTCTTCGACGCCAACCCATCGTTCACGCTGACGCTGAGCGACA TGGAGCAGTTCAATCGGGTGCAGTTCCTGATCGAATCGACCAATTGCGACACCACGCTGCTGATCCGCGATGCGTCGGGC ACGTTCCACTTCAACGACGATTTCAACTTCCCGACGCACACACGATCCCGGTTGATCCTGAATGACACTGCCAGCCTGAA TGGTCGTGTCGACATCTGGATCGGGCGGTATAATCCGGGGCAGTGTATTTCGACGCTGGAAATCCGCGAACGCAACTAG
Upstream 100 bases:
>100_bases ATGCCGGGTGAGCGGGTGATGAGGGGCATTTCAGCCCTTATCATCACTATAATTTCAAGGGCGCACGCGCCCCCGCAGGA CCAGAAACGGAGGCCCTCCC
Downstream 100 bases:
>100_bases CCGCCTGCGCTACTGAACGGCGTGCACCGGTGGGGTCCCTGTCGACGGGGCCCCACCGTCTTGCGTTGCGAAAGGCCTGC GGCTCCTGTAGCTCCTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MAYQKFLKNEHGAATVDWVVVMAALVGLGVAVTNQTDAALTTESQNIQGEFQNGMFETAWDSSLAVQPDQDAGTTCTGGT SCDPGTGSGGTTLWTGTTTDPDPDPDPDPDPTPDPDPDPTPDPDPDPTTDPDPDPDPDPDPDPTPEPASAPAAGCPSTNY FGVPIASDGSDFGNNNDYTLRTSGYTNLRSCSGLPNRRGFFDANPSFTLTLSDMEQFNRVQFLIESTNCDTTLLIRDASG TFHFNDDFNFPTHTRSRLILNDTASLNGRVDIWIGRYNPGQCISTLEIRERN
Sequences:
>Translated_292_residues MAYQKFLKNEHGAATVDWVVVMAALVGLGVAVTNQTDAALTTESQNIQGEFQNGMFETAWDSSLAVQPDQDAGTTCTGGT SCDPGTGSGGTTLWTGTTTDPDPDPDPDPDPTPDPDPDPTPDPDPDPTTDPDPDPDPDPDPDPTPEPASAPAAGCPSTNY FGVPIASDGSDFGNNNDYTLRTSGYTNLRSCSGLPNRRGFFDANPSFTLTLSDMEQFNRVQFLIESTNCDTTLLIRDASG TFHFNDDFNFPTHTRSRLILNDTASLNGRVDIWIGRYNPGQCISTLEIRERN >Mature_291_residues AYQKFLKNEHGAATVDWVVVMAALVGLGVAVTNQTDAALTTESQNIQGEFQNGMFETAWDSSLAVQPDQDAGTTCTGGTS CDPGTGSGGTTLWTGTTTDPDPDPDPDPDPTPDPDPDPTPDPDPDPTTDPDPDPDPDPDPDPTPEPASAPAAGCPSTNYF GVPIASDGSDFGNNNDYTLRTSGYTNLRSCSGLPNRRGFFDANPSFTLTLSDMEQFNRVQFLIESTNCDTTLLIRDASGT FHFNDDFNFPTHTRSRLILNDTASLNGRVDIWIGRYNPGQCISTLEIRERN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31347; Mature: 31216
Theoretical pI: Translated: 3.74; Mature: 3.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYQKFLKNEHGAATVDWVVVMAALVGLGVAVTNQTDAALTTESQNIQGEFQNGMFETAW CCHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHCCEEEECC DSSLAVQPDQDAGTTCTGGTSCDPGTGSGGTTLWTGTTTDPDPDPDPDPDPTPDPDPDPT CCCEEECCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC PDPDPDPTTDPDPDPDPDPDPDPTPEPASAPAAGCPSTNYFGVPIASDGSDFGNNNDYTL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEE RTSGYTNLRSCSGLPNRRGFFDANPSFTLTLSDMEQFNRVQFLIESTNCDTTLLIRDASG EECCCCCHHHHCCCCCCCCEEECCCCEEEEEHHHHHCCEEEEEEECCCCCEEEEEEECCC TFHFNDDFNFPTHTRSRLILNDTASLNGRVDIWIGRYNPGQCISTLEIRERN EEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCC >Mature Secondary Structure AYQKFLKNEHGAATVDWVVVMAALVGLGVAVTNQTDAALTTESQNIQGEFQNGMFETAW CHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHCCEEEECC DSSLAVQPDQDAGTTCTGGTSCDPGTGSGGTTLWTGTTTDPDPDPDPDPDPTPDPDPDPT CCCEEECCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC PDPDPDPTTDPDPDPDPDPDPDPTPEPASAPAAGCPSTNYFGVPIASDGSDFGNNNDYTL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEE RTSGYTNLRSCSGLPNRRGFFDANPSFTLTLSDMEQFNRVQFLIESTNCDTTLLIRDASG EECCCCCHHHHCCCCCCCCEEECCCCEEEEEHHHHHCCEEEEEEECCCCCEEEEEEECCC TFHFNDDFNFPTHTRSRLILNDTASLNGRVDIWIGRYNPGQCISTLEIRERN EEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA