| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054100
Identifier: 89054100
GI number: 89054100
Start: 1593885
End: 1594334
Strand: Direct
Name: 89054100
Synonym: Jann_1609
Alternate gene names: NA
Gene position: 1593885-1594334 (Clockwise)
Preceding gene: 89054099
Following gene: 89054101
Centisome position: 36.91
GC content: 60.22
Gene sequence:
>450_bases ATGATCCCGACCCTCGCCGGACGTTTGCAGACGCGGATATTCCTGTTCCTTTTCATCGGCCTGCCGATCACTTTCGCCTT TGGCCTCTATATGAATGGGTGGCAGTGGGATTGGCCCGCGATCCAGATCTTCGTCTGGTTTCTCTGCGTCGTGACGGGCG CGGGCCTGCTACTGGACCCGATCTACATCTTCCTGCAATCCCTGCGTTGGGACCGCGACTGGCCATTCCTGTTTCAGGCA TTCTTCTCGTGGGTGGAATTCGCCATCGTCCTCGCCGTAGCCCGCGCGGGTCTTTTGCCTTTCCTCCCGGCGGAGGCGTT CCAGACCCTCGCAACGCCCATCCTGCACTTCACGCTCGTCTTCATCCCCTCCTTCCTGGCGCTTTTGGGGCCGATGCAGG TTCTCTTCATCCGGTGGCGCTTCAAGGGCGGCCAGTTCGGCAAACTCTGA
Upstream 100 bases:
>100_bases CGCGGGCGGCAGCATCAGATGCGCCGGTTCGGGCCGCTTCGGTCGCTGTTGGGCTGGTGCAAATGGATGGTGGGCCGGCG GCCATGACAGAGGTTTCCCC
Downstream 100 bases:
>100_bases TGCGCGGCTCTGCCATGGCGCGTCTTGTTCGGGTCTGGATCCCGATTCATCTGGCGATGTTGGCCGCCGCCTATGCCTGG CTGTTTGCCGAAAGCGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MIPTLAGRLQTRIFLFLFIGLPITFAFGLYMNGWQWDWPAIQIFVWFLCVVTGAGLLLDPIYIFLQSLRWDRDWPFLFQA FFSWVEFAIVLAVARAGLLPFLPAEAFQTLATPILHFTLVFIPSFLALLGPMQVLFIRWRFKGGQFGKL
Sequences:
>Translated_149_residues MIPTLAGRLQTRIFLFLFIGLPITFAFGLYMNGWQWDWPAIQIFVWFLCVVTGAGLLLDPIYIFLQSLRWDRDWPFLFQA FFSWVEFAIVLAVARAGLLPFLPAEAFQTLATPILHFTLVFIPSFLALLGPMQVLFIRWRFKGGQFGKL >Mature_149_residues MIPTLAGRLQTRIFLFLFIGLPITFAFGLYMNGWQWDWPAIQIFVWFLCVVTGAGLLLDPIYIFLQSLRWDRDWPFLFQA FFSWVEFAIVLAVARAGLLPFLPAEAFQTLATPILHFTLVFIPSFLALLGPMQVLFIRWRFKGGQFGKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17238; Mature: 17238
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTLAGRLQTRIFLFLFIGLPITFAFGLYMNGWQWDWPAIQIFVWFLCVVTGAGLLLDP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH IYIFLQSLRWDRDWPFLFQAFFSWVEFAIVLAVARAGLLPFLPAEAFQTLATPILHFTLV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH FIPSFLALLGPMQVLFIRWRFKGGQFGKL HHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIPTLAGRLQTRIFLFLFIGLPITFAFGLYMNGWQWDWPAIQIFVWFLCVVTGAGLLLDP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH IYIFLQSLRWDRDWPFLFQAFFSWVEFAIVLAVARAGLLPFLPAEAFQTLATPILHFTLV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH FIPSFLALLGPMQVLFIRWRFKGGQFGKL HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA