Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054078

Identifier: 89054078

GI number: 89054078

Start: 1569808

End: 1570203

Strand: Reverse

Name: 89054078

Synonym: Jann_1587

Alternate gene names: NA

Gene position: 1570203-1569808 (Counterclockwise)

Preceding gene: 89054079

Following gene: 89054076

Centisome position: 36.36

GC content: 67.42

Gene sequence:

>396_bases
ATGAACTCCCCGCCTCCTCCACCAGAGGTCGCCGCAGCCTACGCCGCGCTGGCCACGCAAGCCCGGCTTCTGGACCTGCG
CGACCTGATCTTCGCGGCAGCCGAGGCAACCGATACAGGCCCCCTGACCGAAACCCTCAAATGGGGCCAGCCGTCGTTTC
TGCCCGCGAAGAAGGCCGGCACCACCCTGCGCCTGGGTGAGGATGCGAGCGCGCCGACGCTGTTTGTGCCCTGTAGCACC
AATCTGCTCGACCGTTATCGTGCGGCATTCCCGTCCGAGTTCACCTATTCCGGCGCCCGCGCGGTCCATCTGCCCGCGGA
AGGCCCGTTTCCCGACGCCGCCTTCCAACAGATCGCGGCCATGGCGCTGACCTACCACCGCGACAAACGCCGCTGA

Upstream 100 bases:

>100_bases
CCTCTACCAATCCGGGGCGTGGCTGGTCCTGCCTGCGGGGCTGGAGGCGTGCATCCCAAATTTCCTTCGGGAAACGCCCG
CCACGCGCTAGGGTCCCGCT

Downstream 100 bases:

>100_bases
CGCACCGCCTCCTCCTTCCCCGTTCCGGAAATATCCCGGAGGGGGTCCGGGGGAGGCAGCGCCTCCCCCGCTGGTCGCCC
AAAGGGCGAAATACCCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MNSPPPPPEVAAAYAALATQARLLDLRDLIFAAAEATDTGPLTETLKWGQPSFLPAKKAGTTLRLGEDASAPTLFVPCST
NLLDRYRAAFPSEFTYSGARAVHLPAEGPFPDAAFQQIAAMALTYHRDKRR

Sequences:

>Translated_131_residues
MNSPPPPPEVAAAYAALATQARLLDLRDLIFAAAEATDTGPLTETLKWGQPSFLPAKKAGTTLRLGEDASAPTLFVPCST
NLLDRYRAAFPSEFTYSGARAVHLPAEGPFPDAAFQQIAAMALTYHRDKRR
>Mature_131_residues
MNSPPPPPEVAAAYAALATQARLLDLRDLIFAAAEATDTGPLTETLKWGQPSFLPAKKAGTTLRLGEDASAPTLFVPCST
NLLDRYRAAFPSEFTYSGARAVHLPAEGPFPDAAFQQIAAMALTYHRDKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14101; Mature: 14101

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPPPPPEVAAAYAALATQARLLDLRDLIFAAAEATDTGPLTETLKWGQPSFLPAKKAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC
TTLRLGEDASAPTLFVPCSTNLLDRYRAAFPSEFTYSGARAVHLPAEGPFPDAAFQQIAA
CEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHH
MALTYHRDKRR
HHHHHHHCCCC
>Mature Secondary Structure
MNSPPPPPEVAAAYAALATQARLLDLRDLIFAAAEATDTGPLTETLKWGQPSFLPAKKAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC
TTLRLGEDASAPTLFVPCSTNLLDRYRAAFPSEFTYSGARAVHLPAEGPFPDAAFQQIAA
CEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHH
MALTYHRDKRR
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA