Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054063

Identifier: 89054063

GI number: 89054063

Start: 1550441

End: 1550995

Strand: Direct

Name: 89054063

Synonym: Jann_1572

Alternate gene names: NA

Gene position: 1550441-1550995 (Clockwise)

Preceding gene: 89054062

Following gene: 89054064

Centisome position: 35.91

GC content: 67.39

Gene sequence:

>555_bases
ATGAGACTTGCCCCATTCATCGCCGCCCTTGTCCTGATCCTCGCGGGATGCGGCAGCGATCCGGCCCGCCTGTCCATCGA
GCCGTCGGCCTCCGCGATGCAGACGCGCGTTTCCGTGCGGTCGGTGGTGGTGGGCGATATCTCCCTGCCTGAATATGCCA
ATGCCTCCGAGGTGGTGCGCGAGGGCGAAAACGGCCTGGTGGAAACGGTGCCGGACCTGATCTGGGCCGATGTGCCCGAG
GATGCGATGGCCAACGCGTTGGTCCGGCATCTGTCGCAGATCACCGGCGTGGCCGTGGCACGCGCGCCCTGGCCACTCAG
CTCATTTCCCGATGCCGAGCTGACGGTGCGGGCCGAGCGGATGTTGCTGGGGGCCGATGGGCGCCTGCACCTGAGCGGGC
AGTTCGCCGTCCGCCGCGACGAGGGAACCTGGGCCGAACGGATCCGCAGTTTCGACATCGCGGTGCCCGTGCAGGGCGCG
GAGCTGACGGATCTTGCCGATGCCCACGCGGATGCCTGGCGGCAATTGTCTGAACAGATTGCGGGTCAGCTGTAG

Upstream 100 bases:

>100_bases
CGCGCCGCGATTGCCGATATCAGCCAGGCCGCTGATGCCTTCCGGTCTCTTGCCCGCGCGATTGAGCGCAACCCGAACTC
CCTGATCACAGGACGTTGAC

Downstream 100 bases:

>100_bases
CGCTGCCTGCTGGACAGATCCCTTAATTTCAGCGCTTGATGGGTTTTGGGCCCGGCGCGTTGGTGCCGCGTCCCCCCATG
GAGTGGGCGCATATGACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MRLAPFIAALVLILAGCGSDPARLSIEPSASAMQTRVSVRSVVVGDISLPEYANASEVVREGENGLVETVPDLIWADVPE
DAMANALVRHLSQITGVAVARAPWPLSSFPDAELTVRAERMLLGADGRLHLSGQFAVRRDEGTWAERIRSFDIAVPVQGA
ELTDLADAHADAWRQLSEQIAGQL

Sequences:

>Translated_184_residues
MRLAPFIAALVLILAGCGSDPARLSIEPSASAMQTRVSVRSVVVGDISLPEYANASEVVREGENGLVETVPDLIWADVPE
DAMANALVRHLSQITGVAVARAPWPLSSFPDAELTVRAERMLLGADGRLHLSGQFAVRRDEGTWAERIRSFDIAVPVQGA
ELTDLADAHADAWRQLSEQIAGQL
>Mature_184_residues
MRLAPFIAALVLILAGCGSDPARLSIEPSASAMQTRVSVRSVVVGDISLPEYANASEVVREGENGLVETVPDLIWADVPE
DAMANALVRHLSQITGVAVARAPWPLSSFPDAELTVRAERMLLGADGRLHLSGQFAVRRDEGTWAERIRSFDIAVPVQGA
ELTDLADAHADAWRQLSEQIAGQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19734; Mature: 19734

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAPFIAALVLILAGCGSDPARLSIEPSASAMQTRVSVRSVVVGDISLPEYANASEVVR
CCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHEEECCCCCCCCCHHHHHH
EGENGLVETVPDLIWADVPEDAMANALVRHLSQITGVAVARAPWPLSSFPDAELTVRAER
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHH
MLLGADGRLHLSGQFAVRRDEGTWAERIRSFDIAVPVQGAELTDLADAHADAWRQLSEQI
EEECCCCEEEECCEEEEEECCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
AGQL
CCCC
>Mature Secondary Structure
MRLAPFIAALVLILAGCGSDPARLSIEPSASAMQTRVSVRSVVVGDISLPEYANASEVVR
CCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHEEECCCCCCCCCHHHHHH
EGENGLVETVPDLIWADVPEDAMANALVRHLSQITGVAVARAPWPLSSFPDAELTVRAER
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHH
MLLGADGRLHLSGQFAVRRDEGTWAERIRSFDIAVPVQGAELTDLADAHADAWRQLSEQI
EEECCCCEEEECCEEEEEECCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
AGQL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA